RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TMEM248Q9NWD8 314 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 DEC1Q9P2X7 70 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 WNT16Q9UBV4 365 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 CLEC4EQ9ULY5 219 aa15.75■□□□□ 0.11
SEC13-215ENST00000477547 MYO18AQ92614 2054 aaKnown RBP15.75■□□□□ 0.11
SEC13-215ENST00000477547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.74■□□□□ 0.11
SEC13-215ENST00000477547 C3orf70A6NLC5 250 aaPredicted RBP15.74■□□□□ 0.11
SEC13-215ENST00000477547 DDX3YO15523 660 aaKnown RBP15.74■□□□□ 0.11
SEC13-215ENST00000477547 RHOCP08134 193 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 GLULP15104 373 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 OR1E1P30953 314 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 SLC6A11P48066 632 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 HCAR3P49019 387 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 MAPKAPK2P49137 400 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 LMAN2Q12907 356 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 ZNF177Q13360 481 aaPredicted RBP15.74■□□□□ 0.11
SEC13-215ENST00000477547 C6orf118Q5T5N4 469 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 MEI1Q5TIA1 1274 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 CXorf57Q6NSI4 855 aaKnown RBP15.74■□□□□ 0.11
SEC13-215ENST00000477547 C1orf228Q6PIY5 440 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 SPOCD1Q6ZMY3 1216 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 ANKS1BQ7Z6G8 1248 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 VSIG1Q86XK7 387 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 SIX5Q8N196 739 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 EXD1Q8NHP7 514 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 EXOC4Q96A65 974 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 FAF2Q96CS3 445 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 P2RY13Q9BPV8 354 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 ABCB8Q9NUT2 735 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.74■□□□□ 0.11
SEC13-215ENST00000477547 ZNF212Q9UDV6 495 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 GGA2Q9UJY4 613 aa15.74■□□□□ 0.11
SEC13-215ENST00000477547 GVINP1Q7Z2Y8 2422 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 MED19A0JLT2 244 aaPredicted RBP15.73■□□□□ 0.11
SEC13-215ENST00000477547 KRBA1A5PL33 1030 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 ZNF487B1APH4 448 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 TRIM24O15164 1050 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 ZRANB2O95218 330 aaKnown RBP eCLIP15.73■□□□□ 0.11
SEC13-215ENST00000477547 PABPC1P11940 636 aaKnown RBP15.73■□□□□ 0.11
SEC13-215ENST00000477547 ERCC2P18074 760 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 AMPD1P23109 780 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 HLA-FP30511 346 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 CD70P32970 193 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 CSKP41240 450 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 GNG11P61952 73 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 PRKCQQ04759 706 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 PON2Q15165 354 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 RPS6KA1Q15418 735 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 ANKRD20A8PQ5CZ79 823 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 FSCBQ5H9T9 825 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
SEC13-215ENST00000477547 TMCO3Q6UWJ1 677 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 MFSD7Q6UXD7 560 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 PHTF2Q8N3S3 785 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 TERB1Q8NA31 727 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 FIBINQ8TAL6 211 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.73■□□□□ 0.11
SEC13-215ENST00000477547 PNKPQ96T60 521 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 DMXL1Q9Y485 3027 aa15.73■□□□□ 0.11
SEC13-215ENST00000477547 WASH4PA8MWX3 477 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 MAN2B1O00754 1011 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 DCLK1O15075 740 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 APODP05090 189 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 CDKN2BP42772 138 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 PEX5P50542 639 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 OXCT1P55809 520 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 MESP2Q0VG99 397 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 ZNF211Q13398 564 aaPredicted RBP15.72■□□□□ 0.11
SEC13-215ENST00000477547 PPP2R5EQ16537 467 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 FUT11Q495W5 492 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 PREPLQ4J6C6 727 aaPredicted RBP15.72■□□□□ 0.11
SEC13-215ENST00000477547 TFDP3Q5H9I0 405 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 DCAF12L1Q5VU92 463 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 SETD3Q86TU7 594 aaPredicted RBP15.72■□□□□ 0.11
SEC13-215ENST00000477547 RFX6Q8HWS3 928 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 RCOR2Q8IZ40 523 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 AHI1Q8N157 1196 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 NPWQ8N729 165 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC13-215ENST00000477547 OR52K2Q8NGK3 314 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 PCDH19Q8TAB3 1148 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 WFIKKN2Q8TEU8 576 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 UBE2Q2Q8WVN8 375 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 FAM3CQ92520 227 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 SHDQ96IW2 340 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 PSMB7Q99436 277 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 TLR10Q9BXR5 811 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 MUC3BQ9H195 1237 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 RETREG1Q9H6L5 497 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 NDFIP2Q9NV92 336 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 DONSONQ9NYP3 566 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 KIAA1522Q9P206 1035 aaPredicted RBP15.72■□□□□ 0.11
SEC13-215ENST00000477547 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 NDRG2Q9UN36 371 aaKnown RBP15.72■□□□□ 0.11
SEC13-215ENST00000477547 TBC1D30Q9Y2I9 924 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 SLC27A6Q9Y2P4 619 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 JRKLQ9Y4A0 524 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 MFHAS1Q9Y4C4 1052 aa15.72■□□□□ 0.11
SEC13-215ENST00000477547 WDR87Q6ZQQ6 2873 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms