RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 LSP1P33241 339 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 IFNAR2P48551 515 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF135P52742 658 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 SARNPP82979 210 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 HECTD3Q5T447 861 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ARTNQ5T4W7 220 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 DENND1CQ8IV53 801 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 C7orf61Q8IZ16 206 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 UNC5BQ8IZJ1 945 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 CNTD1Q8N815 330 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 DNAAF3Q8N9W5 541 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 OR52K1Q8NGK4 314 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 SPATA22Q8NHS9 363 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 SIGLEC10Q96LC7 697 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 STMN4Q9H169 189 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TRPC7Q9HCX4 862 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TRPM5Q9NZQ8 1165 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 DNMT3LQ9UJW3 386 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 A0A1W2PPM1 405 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 LCHNA4D1U4 455 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 GOLGA8RI6L899 631 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 FGF10O15520 208 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MAFKO60675 156 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 FAM155BO75949 473 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 CXCL14O95715 111 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MT-CYBP00156 380 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 CNPP09543 421 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 CSH1P0DML2 217 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 CSH2P0DML3 217 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TPH1P17752 444 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TPSB2P20231 275 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MSH2P43246 934 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 GEMIN4P57678 1058 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 VEPH1Q14D04 833 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TPSAB1Q15661 275 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TRMT10BQ6PF06 316 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TAOK1Q7L7X3 1001 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 C4orf33Q8N1A6 199 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 PPM1NQ8N819 430 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 RTL3Q8N8U3 475 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MCUQ8NE86 351 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 BCAS4Q8TDM0 211 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 C1orf74Q96LT6 269 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 PAFAH2Q99487 392 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 KLF6Q99612 283 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TTLL2Q9BWV7 592 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ZYG11BQ9C0D3 744 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 IL1RAPL1Q9NZN1 696 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 IPO11Q9UI26 975 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 PRRC2BQ5JSZ5 2229 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 PATJQ8NI35 1801 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 C5orf42Q9H799 3197 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TMEM120BA0PK00 339 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 CCDC78A2IDD5 438 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 J3KR12 359 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ATP9BO43861 1147 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TCEA3O75764 348 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 OR1E1P30953 314 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MAGEA6P43360 314 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MMP13P45452 471 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 FPGSQ05932 587 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ITKQ08881 620 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 RAB33AQ14088 237 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TNFAIP8L3Q5GJ75 292 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TPGS2Q68CL5 300 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 NADSYN1Q6IA69 706 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 UNC5AQ6ZN44 842 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 SPRED2Q7Z698 418 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 LGI2Q8N0V4 545 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 MAML1Q92585 1016 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 PABPC5Q96DU9 382 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF419Q96HQ0 510 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 TEKT5Q96M29 485 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 KLHL5Q96PQ7 755 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 NOL6Q9H6R4 1146 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 INTS9Q9NV88 658 aaKnown RBP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 RBM22Q9NW64 420 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCDC30-209ENST00000477155 IKBKGQ9Y6K9 419 aa6.79□□□□□ -1.32
CCDC30-209ENST00000477155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 TTC24A2A3L6 582 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 CXorf49A8MYA2 514 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 TSPAN3O60637 253 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 UGT1A9O60656 530 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 SHOX2O60902 331 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 BAIAP3O94812 1187 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 ETFBP38117 255 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 HARS2P49590 506 aaKnown RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 RPS24P62847 133 aaKnown RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 COG7P83436 770 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 MPP2Q14168 576 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 TXNDC8Q6A555 127 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 FOXR1Q6PIV2 292 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 TADA2BQ86TJ2 420 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 LZTR1Q8N653 840 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-209ENST00000477155 MICAL1Q8TDZ2 1067 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 BHMTQ93088 406 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 WBP2Q969T9 261 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 HMCESQ96FZ2 354 aa6.78□□□□□ -1.32
CCDC30-209ENST00000477155 SLC22A12Q96S37 553 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms