RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 TUBA1CQ9BQE3 449 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ERP44Q9BS26 406 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 TRIM54Q9BYV2 358 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 OSBPL6Q9BZF3 934 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 TP63Q9H3D4 680 aaPredicted RBP6.22□□□□□ -1.41
RTF1-203ENST00000473214 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 TMOD2Q9NZR1 351 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 DAPP1Q9UN19 280 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 CLDN16Q9Y5I7 305 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 SNX11Q9Y5W9 270 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 SNX9Q9Y5X1 595 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 B3GALT1Q9Y5Z6 326 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 MROH5Q6ZUA9 1318 aa6.22□□□□□ -1.41
RTF1-203ENST00000473214 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 LIPT2A6NK58 231 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 TMEM232C9JQI7 657 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 O00370 1275 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 MEIS1O00470 390 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PRRG2O14669 202 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 FANCGO15287 622 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RNF113AO15541 343 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 SPOPO43791 374 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 VEGFDO43915 354 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 GMFGO60234 142 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RNGTTO60942 597 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 LARGE1O95461 756 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 C22orf31O95567 290 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 POLR2MP0CAP2 368 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SP100P23497 879 aaPredicted RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 BSGP35613 385 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 MCAMP43121 646 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PITPNBP48739 271 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 FLT3LGP49771 235 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 LIG4P49917 911 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SESN2P58004 480 aaPredicted RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 PRKCEQ02156 737 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PRKCZQ05513 592 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PPATQ06203 517 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ELP6Q0PNE2 266 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SLC13A2Q13183 592 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 CHIT1Q13231 466 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 CAMK1Q14012 370 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 IRF3Q14653 427 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 CRYMQ14894 314 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 MEP1BQ16820 701 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PRICKLE4Q2TBC4 344 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 BTBD16Q32M84 506 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SLC39A12Q504Y0 691 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 TMTC4Q5T4D3 741 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 KLC3Q6P597 504 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 TMEM270Q6UE05 265 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 B3GNT6Q6ZMB0 384 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ARHGAP27Q6ZUM4 889 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ZSWIM9Q86XI8 627 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PHYKPLQ8IUZ5 450 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RHOT1Q8IXI2 618 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 CCDC65Q8IXS2 484 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ADGRF2Q8IZF7 708 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SYT2Q8N9I0 419 aaPredicted RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 POC5Q8NA72 575 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SLC4A11Q8NBS3 891 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 URGCPQ8TCY9 931 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PRPF31Q8WWY3 499 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 DHX58Q96C10 678 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ADAD1Q96M93 576 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 TOX2Q96NM4 488 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 SAMD11Q96NU1 681 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 VRK1Q99986 396 aaPredicted RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 CAPS2Q9BXY5 557 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PUS3Q9BZE2 481 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 PCDHAC1Q9H158 963 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 VPS16Q9H269 839 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 KAT14Q9H8E8 782 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RXFP1Q9HBX9 757 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RPRD1BQ9NQG5 326 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 PCDHB16Q9NRJ7 776 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 GIMAP4Q9NUV9 329 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ZDHHC7Q9NXF8 308 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 FAM53CQ9NYF3 392 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 CWC15Q9P013 229 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 SRRDQ9UH36 339 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 LIMA1Q9UHB6 759 aaKnown RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 TEKT2Q9UIF3 430 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RCOR1Q9UKL0 485 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 TBC1D30Q9Y2I9 924 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 PCDHGA5Q9Y5G8 931 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 KCNE2Q9Y6J6 123 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 NCANO14594 1321 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 CLTCL1P53675 1640 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 RGPD8O14715 1765 aaPredicted RBP6.21□□□□□ -1.42
RTF1-203ENST00000473214 CHD4Q14839 1912 aa6.21□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD30AQ9BXX3 1397 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 PLEKHH1Q9ULM0 1364 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 NAIPQ13075 1403 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 TNS3Q68CZ2 1445 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 ANKRD50Q9ULJ7 1429 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 GLOD5A6NK44 160 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 OR6C76A6NM76 312 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 H0YIV9 168 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms