RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SAMD5Q5TGI4 173 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 DNAJC24Q6P3W2 148 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 LCLAT1Q6UWP7 414 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PHLDB2Q86SQ0 1253 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM150AQ86TG1 271 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 RASSF3Q86WH2 238 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 METTL23Q86XA0 190 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PHF13Q86YI8 300 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 MCOLN2Q8IZK6 566 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 RNF10Q8N5U6 811 aaKnown RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 C12orf29Q8N999 325 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ATAD1Q8NBU5 361 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 MSANTD4Q8NCY6 345 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TSTD1Q8NFU3 115 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 SLC35G2Q8TBE7 412 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF564Q8TBZ8 553 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PIGKQ92643 395 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 USP13Q92995 863 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ACDQ96AP0 544 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TNIP3Q96KP6 325 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 P2RY13Q9BPV8 354 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 LPIN3Q9BQK8 851 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 NUP85Q9BW27 656 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TPSD1Q9BZJ3 242 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF518BQ9C0D4 1074 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 GOLPH3Q9H4A6 298 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 SLC32A1Q9H598 525 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 SYNCQ9H7C4 482 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 THG1LQ9NWX6 298 aaKnown RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 DDX43Q9NXZ2 648 aaKnown RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ADAM22Q9P0K1 906 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 HESX1Q9UBX0 185 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 CHORDC1Q9UHD1 332 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 CYTH4Q9UIA0 394 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 FOXD3Q9UJU5 478 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ASB3Q9Y575 518 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TIMM13Q9Y5L4 95 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ANAPC1Q9H1A4 1944 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PLXNB3Q9ULL4 1909 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 MGAQ8IWI9 3026 aa6.65□□□□□ -1.35
HDAC1-205ENST00000472928 USP9XQ93008 2570 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 KIAA1549LQ6ZVL6 1849 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 OR6C75A6NL08 312 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 H0Y626 953 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 GOLGA8SH3BPF8 625 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ENC1O14682 589 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 BUB1BO60566 1050 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 URI1O94763 535 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 MTA2O94776 668 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 TRIM16O95361 564 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 FGF19O95750 216 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ATP1A1P05023 1023 aaKnown RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 CYP11A1P05108 521 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 SETSIPP0DME0 302 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 HNRNPLP14866 589 aaKnown RBP eCLIP6.64□□□□□ -1.351e-6■□□□□ 10.5
HDAC1-205ENST00000472928 ENGP17813 658 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ATF6P18850 670 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 TYMPP19971 482 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 MMP8P22894 467 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 PAX3P23760 479 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 RRM1P23921 792 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 LMO2P25791 158 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 GJA4P35212 333 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 PTGER3P43115 390 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ALDH1A3P47895 512 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 LHX1P48742 406 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 DHPSP49366 369 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 RGS7P49802 495 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 DNA2P51530 1060 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 YWHAHQ04917 246 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 GABPB1Q06547 395 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 BST2Q10589 180 aaKnown RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 LMAN2Q12907 356 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 PTP4A2Q12974 167 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 CNGA2Q16280 664 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 FBXO43Q4G163 708 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 USP39Q53GS9 565 aaKnown RBP6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ARHGAP17Q68EM7 881 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 OVOS1Q6IE37 1185 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 C11orf63Q6NUN7 778 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ZNF438Q7Z4V0 828 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 DAAM2Q86T65 1068 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 FAM35AQ86V20 835 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 C11orf74Q86VG3 221 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 TTC30AQ86WT1 665 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ERICH1Q86X53 443 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 CMTM8Q8IZV2 173 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 PGBD3Q8N328 593 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 LRRC57Q8N9N7 239 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 MDGA1Q8NFP4 955 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 UBA3Q8TBC4 463 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 SPATA18Q8TC71 538 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 SLC2A14Q8TDB8 520 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 CPXM1Q96SM3 734 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 MED10Q9BTT4 135 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 LHX5Q9H2C1 402 aa6.64□□□□□ -1.35
HDAC1-205ENST00000472928 ATP13A2Q9NQ11 1180 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms