RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 VIPR2P41587 438 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 CARSP49589 748 aaKnown RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 PAPOLAP51003 745 aaKnown RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 DRG2P55039 364 aaKnown RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 PPIDQ08752 370 aaKnown RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 AP1B1Q10567 949 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 ZNF77Q15935 545 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 FAM78AQ5JUQ0 283 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 ARHGAP36Q6ZRI8 547 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 SYDE1Q6ZW31 735 aaPredicted RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 HDAC11Q96DB2 347 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 MSLNLQ96KJ4 702 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 QKIQ96PU8 341 aaKnown RBP eCLIP13.17□□□□□ -0.3
RUNX1-213ENST00000469087 RAB17Q9H0T7 212 aa13.17□□□□□ -0.3
RUNX1-213ENST00000469087 PPP1R12AO14974 1030 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 CLDN11O75508 207 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 MYBL2P10244 700 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 MX2P20592 715 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 VPS41P49754 854 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 NDST2P52849 883 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 CES5AQ6NT32 575 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 CDKL3Q8IVW4 592 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 MICALL1Q8N3F8 863 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 CELF5Q8N6W0 485 aaKnown RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 CCDC89Q8N998 374 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-213ENST00000469087 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 RSPRY1Q96DX4 576 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 ASB16Q96NS5 453 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
RUNX1-213ENST00000469087 NYNRINQ9P2P1 1898 aaKnown RBP13.15□□□□□ -0.3
RUNX1-213ENST00000469087 A0A1B0GVM2 712 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 CFAP69A5D8W1 941 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 TCAF2A6NFQ2 919 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 RASA4BC9J798 803 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 KCNK1O00180 336 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 TP73O15350 636 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 RASA4O43374 803 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 MAFKO60675 156 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 TBL1XO60907 577 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 ADCY8P40145 1251 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 MAPKAPK2P49137 400 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 USP4Q13107 963 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 POLD3Q15054 466 aaPredicted RBP13.15□□□□□ -0.3
RUNX1-213ENST00000469087 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
RUNX1-213ENST00000469087 ADGRG2Q8IZP9 1017 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 BHMTQ93088 406 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.3
RUNX1-213ENST00000469087 TSGA13Q96PP4 275 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 BRD8Q9H0E9 1235 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 GRHL1Q9NZI5 618 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 ASIC3Q9UHC3 531 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 SHROOM3Q8TF72 1996 aa13.15□□□□□ -0.3
RUNX1-213ENST00000469087 NUP210Q8TEM1 1887 aaPredicted RBP13.15□□□□□ -0.3
RUNX1-213ENST00000469087 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.15□□□□□ -0.31
RUNX1-213ENST00000469087 A0A0D9SEW6 157 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 TUBBP07437 444 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 CCNCP24863 283 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 NUMBP49757 651 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 WASHC5Q12768 1159 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 GPS1Q13098 491 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 ZNF177Q13360 481 aaPredicted RBP13.15□□□□□ -0.31
RUNX1-213ENST00000469087 FSCBQ5H9T9 825 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 CHST9Q7L1S5 443 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 TMEM25Q86YD3 366 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.31
RUNX1-213ENST00000469087 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 DDI1Q8WTU0 396 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 RUBCNQ92622 972 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 SMARCD2Q92925 531 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 HMCESQ96FZ2 354 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.31
RUNX1-213ENST00000469087 PLK2Q9NYY3 685 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 CDH7Q9ULB5 785 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.31
RUNX1-213ENST00000469087 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
RUNX1-213ENST00000469087 C5orf60A6NFR6 353 aa13.14□□□□□ -0.31
RUNX1-213ENST00000469087 RAMP2O60895 175 aa13.14□□□□□ -0.31
RUNX1-213ENST00000469087 GCATO75600 419 aa13.14□□□□□ -0.31
RUNX1-213ENST00000469087 ECHS1P30084 290 aa13.14□□□□□ -0.31
RUNX1-213ENST00000469087 ACVRL1P37023 503 aa13.14□□□□□ -0.31
RUNX1-213ENST00000469087 YBEYP58557 167 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms