RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CD48P09326 243 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TNNT1P13805 278 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 ERCC2P18074 760 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 CD70P32970 193 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 ETFBP38117 255 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 PEX5P50542 639 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 RWDD2BP57060 319 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 MESP2Q0VG99 397 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 LRRC32Q14392 662 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 E2F5Q15329 346 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TAZQ16635 292 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 ODF2Q5BJF6 829 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 MEI1Q5TIA1 1274 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TFAP2DQ7Z6R9 452 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 RCOR2Q8IZ40 523 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 UMODL1-AS1Q8N2C9 162 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 LZTR1Q8N653 840 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 UBL4BQ8N7F7 174 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 KRT35Q92764 455 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
GPC1-207ENST00000466624 CALN1Q9BXU9 219 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 KLHL11Q9NVR0 708 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TRMT1Q9NXH9 659 aaKnown RBP16.43■□□□□ 0.22
GPC1-207ENST00000466624 STARD13Q9Y3M8 1113 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
GPC1-207ENST00000466624 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 CXorf51AA0A1B0GTR3 108 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 TBC1D3BA6NDS4 549 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 USP27XA6NNY8 438 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 NCAM2O15394 837 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 DDX3YO15523 660 aaKnown RBP16.42■□□□□ 0.22
GPC1-207ENST00000466624 TIMM44O43615 452 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.22
GPC1-207ENST00000466624 CD72P21854 359 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 MSNP26038 577 aaKnown RBP16.42■□□□□ 0.22
GPC1-207ENST00000466624 TARSP26639 723 aaKnown RBP16.42■□□□□ 0.22
GPC1-207ENST00000466624 MARCKSL1P49006 195 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 NDST2P52849 883 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 YBEYP58557 167 aaPredicted RBP16.42■□□□□ 0.22
GPC1-207ENST00000466624 COPS2P61201 443 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 GEN1Q17RS7 908 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 PLEKHG6Q3KR16 790 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 ANKRD20A8PQ5CZ79 823 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 BMP8AQ7Z5Y6 402 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 ADIPOR2Q86V24 386 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 PJA1Q8NG27 643 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 OR52K2Q8NGK3 314 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 EZH1Q92800 747 aaPredicted RBP16.42■□□□□ 0.22
GPC1-207ENST00000466624 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 ALG14Q96F25 216 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 RNF157Q96PX1 679 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 MAGEH1Q9H213 219 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 NDFIP2Q9NV92 336 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 NDRG2Q9UN36 371 aaKnown RBP16.42■□□□□ 0.22
GPC1-207ENST00000466624 OR51B4Q9Y5P0 310 aa16.42■□□□□ 0.22
GPC1-207ENST00000466624 MYO18AQ92614 2054 aaKnown RBP16.41■□□□□ 0.22
GPC1-207ENST00000466624 PRRT4C9JH25 899 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 K7EQS6 105 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 KIF5CO60282 957 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 RAMP2O60895 175 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 EGFP01133 1207 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 ASLP04424 464 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 CHRNB1P11230 501 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 AMPD1P23109 780 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 SERPINB6P35237 376 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 CSKP41240 450 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 CDKN2BP42772 138 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 MAGEA9P43362 315 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 GNA12Q03113 381 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 SULT2A1Q06520 285 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 MMRN1Q13201 1228 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 UBXN2BQ14CS0 331 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 PPP2R5EQ16537 467 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 PARP15Q460N3 678 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 FUT11Q495W5 492 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 PITRM1Q5JRX3 1037 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 RNF219Q5W0B1 726 aaPredicted RBP16.41■□□□□ 0.22
GPC1-207ENST00000466624 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 MFSD7Q6UXD7 560 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 PCDH19Q8TAB3 1148 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 UCMAQ8WVF2 138 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 ALG3Q92685 438 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 CLDN23Q96B33 292 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
GPC1-207ENST00000466624 FEM1AQ9BSK4 669 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 KLC2Q9H0B6 622 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 INTS6Q9UL03 887 aaKnown RBP16.41■□□□□ 0.22
GPC1-207ENST00000466624 EFR3BQ9Y2G0 817 aa16.41■□□□□ 0.22
GPC1-207ENST00000466624 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 NYNRINQ9P2P1 1898 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 FAM170BA6NMN3 283 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 NPC1O15118 1278 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 HNRNPLP14866 589 aaKnown RBP eCLIP16.4■□□□□ 0.22
GPC1-207ENST00000466624 POLR2EP19388 210 aaKnown RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
GPC1-207ENST00000466624 PTPN7P35236 360 aa16.4■□□□□ 0.22
GPC1-207ENST00000466624 CETN2P41208 172 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms