RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 LIMD1Q9UGP4 676 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 EFR3BQ9Y2G0 817 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 VPS26AO75436 327 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 CCNFP41002 786 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 MAPRE1Q15691 268 aaKnown RBP16.1■□□□□ 0.17
SMC4-204ENST00000462787 PTRHD1Q6GMV3 140 aaKnown RBP16.1■□□□□ 0.17
SMC4-204ENST00000462787 FAM131BQ86XD5 332 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ENKURQ8TC29 256 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 WDCPQ9H6R7 721 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 MAN1C1Q9NR34 630 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 PNPOQ9NVS9 261 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 KIDINS220Q9ULH0 1771 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 DHRS12A0PJE2 317 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 NOMO3P69849 1222 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 C1DQ13901 141 aaKnown RBP16.1■□□□□ 0.17
SMC4-204ENST00000462787 NCF4Q15080 339 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 PLEKHM3Q6ZWE6 761 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ST13P5Q8NFI4 369 aaPredicted RBP16.1■□□□□ 0.17
SMC4-204ENST00000462787 PIF1Q9H611 641 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ABCB10Q9NRK6 738 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 DDIT4Q9NX09 232 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 COQ6Q9Y2Z9 468 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 INSCQ1MX18 579 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 C6orf52Q5T4I8 152 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 FICDQ9BVA6 458 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ZNF408Q9H9D4 720 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ARIH1Q9Y4X5 557 aaPredicted RBP16.1■□□□□ 0.17
SMC4-204ENST00000462787 FOXO6A8MYZ6 492 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 SIN3BO75182 1162 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 ERVK-10P10266 1014 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 GRIA4P48058 902 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 SERPINH1P50454 418 aaKnown RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 WDR4P57081 412 aaKnown RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 LRRC74AQ0VAA2 488 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 USP4Q13107 963 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 PDCD4Q53EL6 469 aaKnown RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 ACOT1Q86TX2 421 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 C10orf107Q8IVU9 208 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 AADATQ8N5Z0 425 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 AFG1LQ8WV93 481 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 PHF21AQ96BD5 680 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 CERS2Q96G23 380 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 IPPQ9Y573 584 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 ERI2A8K979 691 aaKnown RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 SCNN1BP51168 640 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 TRIQKQ629K1 86 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 PIWIL4Q7Z3Z4 852 aaKnown RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 FAM151AQ8WW52 585 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 H2AFY2Q9P0M6 372 aaPredicted RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 A0A0A0MRY4 1105 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 C2orf71A6NGG8 1288 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 PIAS1O75925 651 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 ADRB2P07550 413 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 CSE1LP55060 971 aaKnown RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 TRIP4Q15650 581 aaPredicted RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 ACTRT2Q8TDY3 377 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 NKD2Q969F2 451 aaPredicted RBP16.09■□□□□ 0.17
SMC4-204ENST00000462787 SPATA13Q96N96 652 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 SYT15Q9BQS2 421 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 MID1IP1Q9NPA3 183 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 C3orf18Q9UK00 162 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 CENPXA8MT69 81 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 TAB1Q15750 504 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 CES3Q6UWW8 571 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 CDH24Q86UP0 819 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 LRRC71Q8N4P6 559 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 PSMA8Q8TAA3 256 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 NUAK2Q9H093 628 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 FANCEQ9HB96 536 aa16.09■□□□□ 0.17
SMC4-204ENST00000462787 HBP1O60381 514 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 KRT6BP04259 564 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 KRT6CP48668 564 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 LIPMQ5VYY2 423 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 ANKS1BQ7Z6G8 1248 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 C12orf56Q8IXR9 622 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 AHI1Q8N157 1196 aa16.08■□□□□ 0.17
SMC4-204ENST00000462787 BAZ2BQ9UIF8 2168 aaKnown RBP16.08■□□□□ 0.17
SMC4-204ENST00000462787 PRR23AA6NEV1 266 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 LBPP18428 481 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 ATP5F1P24539 256 aaPredicted RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 MTMR2Q13614 643 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 ARSHQ5FYA8 562 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 PGAM4Q8N0Y7 254 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 MYO1HQ8N1T3 1032 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 SEMA4DQ92854 862 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 FAXDC2Q96IV6 333 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 RIBC2Q9H4K1 309 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 TBC1D13Q9NVG8 400 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 CRNNQ9UBG3 495 aaPredicted RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 MORF4L1Q9UBU8 362 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 MEGF6O75095 1541 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms