RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 HLA-DQA2P01906 255 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 HOXB9P17482 250 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 GPD1P21695 349 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 SFPQP23246 707 aaKnown RBP eCLIP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 BDNFP23560 247 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TACR3P29371 465 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 GJC1P36383 396 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 STAT6P42226 847 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 PAFAH1B1P43034 410 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 AGTR2P50052 363 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 MVDP53602 400 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ADPRHP54922 357 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 NR1H2P55055 460 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CASP6P55212 293 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 SLC37A1P57057 533 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CYP4F2P78329 520 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 B4GALNT1Q00973 533 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 FOXD4Q12950 439 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 PRKG2Q13237 762 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 SEC23BQ15437 767 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 PFKFB3Q16875 520 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ANXA2RQ3ZCQ2 193 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CC2D1BQ5T0F9 858 aaKnown RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TSTD2Q5T7W7 516 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 NAPRTQ6XQN6 538 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 KYAT3Q6YP21 454 aaKnown RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 BRINP3Q76B58 766 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 SCN4BQ8IWT1 228 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 C16orf71Q8IYS4 520 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 FAM47BQ8NA70 645 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 OR52N4Q8NGI2 321 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TBC1D22AQ8WUA7 517 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ZFPM2Q8WW38 1151 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 CENPIQ92674 756 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ZUFSPQ96AP4 578 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 RRP36Q96EU6 259 aaKnown RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 APOPT1Q96IL0 206 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 NPLQ9BXD5 320 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TRIM31Q9BZY9 425 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TTC12Q9H892 705 aaPredicted RBP3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TBC1D22BQ9NU19 505 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ASNSD1Q9NWL6 643 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ASIC5Q9NY37 505 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 MTMR4Q9NYA4 1195 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 TAS2R10Q9NYW0 307 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 FBXO40Q9UH90 709 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ZNHIT2Q9UHR6 403 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 HSF4Q9ULV5 492 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 RCE1Q9Y256 329 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 B3GNT3Q9Y2A9 372 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 PKP3Q9Y446 797 aa3.33□□□□□ -1.88
HDAC6-212ENST00000461608 ANKRD18BA2A2Z9 1011 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 KIF1CO43896 1103 aaKnown RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 DHX16O60231 1041 aaKnown RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PROP1O75360 226 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PDE8BO95263 885 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 HNRNPCP07910 306 aaKnown RBP eCLIP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ALDOCP09972 364 aaKnown RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 AKR1A1P14550 325 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PKMP14618 531 aaKnown RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PRPH2P23942 346 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ABCD3P28288 659 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 TUBP50607 506 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF84P51523 738 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 SLC12A2P55011 1212 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 DCAF7P61962 342 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 GALNT2Q10471 571 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 BYSLQ13895 437 aaKnown RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 NFIL3Q16649 462 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 STRIP1Q5VSL9 837 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 GJB7Q6PEY0 223 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 TMED8Q6PL24 325 aaPredicted RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 NEK10Q6ZWH5 1172 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 RRM2BQ7LG56 351 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ADGRG6Q86SQ4 1221 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 GLCCI1Q86VQ1 547 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 RASAL3Q86YV0 1011 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PAQR4Q8N4S7 273 aaPredicted RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 TDRD7Q8NHU6 1098 aaKnown RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 CLEC4CQ8WTT0 213 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 UCMAQ8WVF2 138 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 STAMQ92783 540 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 KAT2BQ92831 832 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ATP2A3Q93084 1043 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF764Q96H86 408 aaPredicted RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PRR11Q96HE9 360 aaPredicted RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 C5orf34Q96MH7 638 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 GPR78Q96P69 363 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 FRG2BQ96QU4 278 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ABHD14AQ9BUJ0 271 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 PRDM13Q9H4Q3 707 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 RMI1Q9H9A7 625 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 MPP6Q9NZW5 540 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 TLK1Q9UKI8 766 aa3.32□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF335Q9H4Z2 1342 aaPredicted RBP3.32□□□□□ -1.88
HDAC6-212ENST00000461608 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 A0A1W2PPH5 198 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 FAM90A7PA6NKC0 464 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 TTC36A6NLP5 189 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 FAM90A22PA8MWA6 464 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms