RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SETQ01105 290 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 FOXI1Q12951 378 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 PRKG2Q13237 762 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 LARS2Q15031 903 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 CERKLQ49MI3 558 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 SLC45A4Q5BKX6 768 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 MTFR2Q6P444 385 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 TMTC3Q6ZXV5 915 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 B4GALNT4Q76KP1 1039 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 RRM2BQ7LG56 351 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 GALNT7Q86SF2 657 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 TMEM200AQ86VY9 491 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 BRSK2Q8IWQ3 736 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 SCN4BQ8IWT1 228 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 UEVLDQ8IX04 471 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 DIS3L2Q8IYB7 885 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 ADGRF3Q8IZF5 1079 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 GHDCQ8N2G8 530 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 GALNT4Q8N4A0 578 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 LINC01465Q8N7H1 131 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 CCDC89Q8N998 374 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ANKRD52Q8NB46 1076 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 LSM14AQ8ND56 463 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 BEND2Q8NDZ0 799 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 NFKBIDQ8NI38 313 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 CAGE1Q8TC20 777 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ADAMTS15Q8TE58 950 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ADAMTS18Q8TE60 1221 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 CNOT9Q92600 299 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 CELF1Q92879 486 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 ZNF764Q96H86 408 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 ZNF845Q96IR2 970 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 EYA3Q99504 573 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 MPHOSPH8Q99549 860 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ZNF747Q9BV97 191 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 PHF7Q9BWX1 381 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 NPLQ9BXD5 320 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 TTYH1Q9H313 450 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 TTC12Q9H892 705 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 CPNE5Q9HCH3 593 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 BEX4Q9NWD9 120 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 PPP1R14DQ9NXH3 145 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ARL15Q9NXU5 204 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 CD207Q9UJ71 328 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 SLC8A2Q9UPR5 921 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 DHDHQ9UQ10 334 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 OSGIN2Q9Y236 505 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 SPATA31A1Q5TZJ5 1347 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 SALL3Q9BXA9 1300 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 COL4A3Q01955 1670 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 GOLGA6L10A0A0M3HER8 536 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 PI4KAP2A4QPH2 592 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 BTBD19C9JJ37 291 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 MCIDASD6RGH6 385 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 H3BNC9 293 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 H7C1Q1 480 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 SMIM22K7EJ46 135 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 PER2O15055 1255 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 RNF8O76064 485 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 GFPT2O94808 682 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 CBX6O95503 412 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 F9P00740 461 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 CYP2D6P10635 497 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 AKR1A1P14550 325 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 HOXB9P17482 250 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 TGM2P21980 687 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 TACR3P29371 465 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 AVPR2P30518 371 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 HNF1BP35680 557 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 ARL1P40616 181 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 SKIV2L2P42285 1042 aaKnown RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 CTCFP49711 727 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 MVDP53602 400 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 SIM1P81133 766 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 ABHD18Q0P651 414 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 NEXNQ0ZGT2 675 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 SLC14A1Q13336 389 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 IL13RA2Q14627 380 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 TOMM20Q15388 145 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 TBCEQ15813 527 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 ARL13AQ5H913 290 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 SH2D4BQ5SQS7 431 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 GPATCH4Q5T3I0 446 aaKnown RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 RANBP10Q6VN20 620 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 H1FNTQ75WM6 255 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 FASTKD5Q7L8L6 764 aaKnown RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 RNF144BQ7Z419 303 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 NME8Q8N427 588 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 PDILTQ8N807 584 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 KCNG4Q8TDN1 519 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 NEU4Q8WWR8 484 aaPredicted RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 KAT2BQ92831 832 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 ELP4Q96EB1 424 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 SAAL1Q96ER3 474 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 PDLIM2Q96JY6 352 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 ADAD1Q96M93 576 aaKnown RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 C5orf34Q96MH7 638 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 CADM1Q9BY67 442 aaKnown RBP3.44□□□□□ -1.86
VCL-203ENST00000461383 PCED1AQ9H1Q7 454 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 EIF2B3Q9NR50 452 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms