RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CDR2Q01850 454 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 MYL5Q02045 173 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF177Q13360 481 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 TEAD4Q15561 434 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 FSCBQ5H9T9 825 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 CXorf57Q6NSI4 855 aaKnown RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 PPP1R2P3Q6NXS1 205 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 SETD3Q86TU7 594 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 XYLT1Q86Y38 959 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 CFAP52Q8N1V2 620 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 GPT2Q8TD30 523 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 FAM131CQ96AQ9 280 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 MYEOVQ96EZ4 313 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 RPRD1AQ96P16 312 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 SPAG5Q96R06 1193 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 ERGIC2Q96RQ1 377 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 HAPLN3Q96S86 360 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 FEM1AQ9BSK4 669 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 CD93Q9NPY3 652 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 XPO7Q9UIA9 1087 aaKnown RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 SLC25A13Q9UJS0 675 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 HS3ST4Q9Y661 456 aa10.31□□□□□ -0.76
HDLBP-228ENST00000459788 ATXN2Q99700 1313 aaKnown RBP10.31□□□□□ -0.76
HDLBP-228ENST00000459788 COL5A1P20908 1838 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 DOCK9Q9BZ29 2069 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 TRPM6Q9BX84 2022 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 LRRC72A6NJI9 287 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 DRGXA6NNA5 263 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 SIN3BO75182 1162 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 PAGE1O75459 146 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 GOT1P17174 413 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 MMP8P22894 467 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 ACSL1P33121 698 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 SOX5P35711 763 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 STAT1P42224 750 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 MAPK8P45983 427 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 CLCN6P51797 869 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 PITX1P78337 314 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 KRT83P78385 493 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 NRG1Q02297 640 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF252P-AS1Q0IIN9 211 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 CCDC15Q0P6D6 951 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 GRIK2Q13002 908 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 NME3Q13232 169 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 CST6Q15828 149 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF423Q2M1K9 1284 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 UAP1L1Q3KQV9 507 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 CCDC183Q5T5S1 534 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 FAM102AQ5T9C2 384 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 FAM46CQ5VWP2 391 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 LRRC31Q6UY01 552 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 DBX2Q6ZNG2 339 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 GLRX5Q86SX6 157 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 NOP9Q86U38 636 aaKnown RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 DEFB119Q8N690 84 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 OR2T34Q8NGX1 318 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 PTPRN2Q92932 1015 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 ALG14Q96F25 216 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 FAM129BQ96TA1 746 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 C2orf49Q9BVC5 232 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 GTPBP2Q9BX10 602 aaKnown RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 NAT10Q9H0A0 1025 aaKnown RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 PIGVQ9NUD9 493 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 FBXL12Q9NXK8 326 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 TAB2Q9NYJ8 693 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 PPARGC1AQ9UBK2 798 aaKnown RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 NOCTQ9UK39 431 aaKnown RBP10.3□□□□□ -0.76
HDLBP-228ENST00000459788 MYO6Q9UM54 1294 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 HS3ST2Q9Y278 367 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 SIK3Q9Y2K2 1263 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 OR51B4Q9Y5P0 310 aa10.3□□□□□ -0.76
HDLBP-228ENST00000459788 PTPRBP23467 1997 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 FAM221BA6H8Z2 402 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 TMEM8BA6NDV4 472 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 LGALS16A8MUM7 142 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 GRAP2O75791 330 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 CD59P13987 128 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF18P17022 549 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 SLC8A1P32418 973 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 ETFBP38117 255 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 PTPN9P43378 593 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 SULT1E1P49888 294 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 COPB1P53618 953 aaKnown RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 RACK1P63244 317 aaKnown RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 DEUP1Q05D60 604 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 SLC20A2Q08357 652 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 SUZ12Q15022 739 aaKnown RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 HSP90AA4PQ58FG1 418 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 C6orf118Q5T5N4 469 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 OTUD1Q5VV17 481 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-228ENST00000459788 KIAA0895LQ68EN5 471 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 STRADAQ7RTN6 431 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 ZNF683Q8IZ20 524 aa10.29□□□□□ -0.76
HDLBP-228ENST00000459788 APCDD1Q8J025 514 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms