RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 PARP15Q460N3 678 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 ATP13A4Q4VNC1 1196 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 ZFYVE27Q5T4F4 411 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 CIR1Q86X95 450 aaPredicted RBP14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 REXO1L1PQ8IX06 675 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 KDM1BQ8NB78 822 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 PJA1Q8NG27 643 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 RAPGEF5Q92565 580 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 TTC17Q96AE7 1141 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 RBM41Q96IZ5 413 aaKnown RBP14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 MAGEH1Q9H213 219 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 GOLPH3Q9H4A6 298 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 FBRSL1Q9HCM7 1045 aaKnown RBP14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 ABCB8Q9NUT2 735 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 PYCARDQ9ULZ3 195 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 SIT1Q9Y3P8 196 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 HYOU1Q9Y4L1 999 aa14.69□□□□□ -0.06
HMGXB4-204ENST00000455359 KIF5CO60282 957 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 RAMP2O60895 175 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 KRT1P04264 644 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 ASLP04424 464 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 RHOCP08134 193 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 ZFXP17010 805 aaPredicted RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 ERCC2P18074 760 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 TARSP26639 723 aaKnown RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 CD70P32970 193 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 GJC1P36383 396 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 PEX5P50542 639 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 VASPP50552 380 aaPredicted RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 RWDD2BP57060 319 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 MRPS21P82921 87 aaKnown RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 GNA12Q03113 381 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 KDSRQ06136 332 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 UBXN2BQ14CS0 331 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 TAZQ16635 292 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 GEN1Q17RS7 908 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 PLEKHG6Q3KR16 790 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 FSCBQ5H9T9 825 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 ASTLQ6HA08 431 aaPredicted RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 TRMT11Q7Z4G4 463 aaKnown RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 TFAP2DQ7Z6R9 452 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 ADIPOR2Q86V24 386 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 LRRC49Q8IUZ0 686 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 HES6Q96HZ4 224 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 FEM1AQ9BSK4 669 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 C2orf49Q9BVC5 232 aaPredicted RBP14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 ELOVL2Q9NXB9 296 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 EFR3BQ9Y2G0 817 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 OR51B4Q9Y5P0 310 aa14.68□□□□□ -0.06
HMGXB4-204ENST00000455359 C3orf70A6NLC5 250 aaPredicted RBP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 K7EQS6 105 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 STK25O00506 426 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 DCLK1O15075 740 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 ATG13O75143 517 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 EGFP01133 1207 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 DLDP09622 509 aaKnown RBP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 HNRNPLP14866 589 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 AOC1P19801 751 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 CD72P21854 359 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 SERPINB6P35237 376 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 CETN2P41208 172 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 CSKP41240 450 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 TFDP2Q14188 446 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 PPP2R5EQ16537 467 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 ANKRD20A8PQ5CZ79 823 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 PITRM1Q5JRX3 1037 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 RNF219Q5W0B1 726 aaPredicted RBP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 NAIF1Q69YI7 327 aaPredicted RBP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 TMCO3Q6UWJ1 677 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 DCAF4L2Q8NA75 395 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 WFDC5Q8TCV5 224 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 KRT35Q92764 455 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 ACDQ96AP0 544 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 PBXIP1Q96AQ6 731 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 ALG14Q96F25 216 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 MAK16Q9BXY0 300 aaKnown RBP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 MUC3BQ9H195 1237 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 EPHX3Q9H6B9 360 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 LMAN1LQ9HAT1 526 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 VPS28Q9UK41 221 aa14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 NDRG2Q9UN36 371 aaKnown RBP14.67□□□□□ -0.06
HMGXB4-204ENST00000455359 ZSCAN5CA6NGD5 496 aaPredicted RBP14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 CHURC1-FNTBB4DL54 471 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 TRIM24O15164 1050 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 FTCDO95954 541 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 SRPRAP08240 638 aaKnown RBP14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 CD48P09326 243 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 TNNT1P13805 278 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 POLR2EP19388 210 aaKnown RBP14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 PTPN7P35236 360 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 GEMIN4P57678 1058 aaKnown RBP14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 SLC20A2Q08357 652 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 MESP2Q0VG99 397 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 FZD5Q13467 585 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 POLD3Q15054 466 aaPredicted RBP14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 RPS6KA1Q15418 735 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 MEI1Q5TIA1 1274 aa14.66□□□□□ -0.06
HMGXB4-204ENST00000455359 AFMIDQ63HM1 303 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms