RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 P2RY2P41231 377 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 COPAP53621 1224 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 GALCP54803 685 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 STARD3Q14849 445 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 MAP7D1Q3KQU3 841 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 CCDC122Q5T0U0 273 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 SERPINA13PQ6UXR4 307 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 ZNF783Q6ZMS7 281 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 SLFN11Q7Z7L1 901 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 MRGPRX1Q96LB2 322 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 PEBP4Q96S96 227 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 PSMB7Q99436 277 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 CHP1Q99653 195 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 FEM1AQ9BSK4 669 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 TPSD1Q9BZJ3 242 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 ZNHIT6Q9NWK9 470 aaKnown RBP14.57□□□□□ -0.08
HDAC4-205ENST00000454542 MPP6Q9NZW5 540 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 OR12D3Q9UGF7 316 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 ERVW-1Q9UQF0 538 aa14.57□□□□□ -0.08
HDAC4-205ENST00000454542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 EIF3CLB5ME19 914 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 GFRA3O60609 400 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 RHOCP08134 193 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 HLA-EP13747 358 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 RHOQP17081 205 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 DESP17661 470 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 HTR7P34969 479 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 PCK1P35558 622 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 CTSOP43234 321 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 MAPKAPK2P49137 400 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 SULT2A1Q06520 285 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 ZNF177Q13360 481 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 ACAP1Q15027 740 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 HNRNPA1L2Q32P51 320 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 FNDC3BQ53EP0 1204 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 TFAP2DQ7Z6R9 452 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 METTL3Q86U44 580 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 C11orf74Q86VG3 221 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 DCAF4L2Q8NA75 395 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 TBC1D31Q96DN5 1066 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 ZC3H10Q96K80 434 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 EIF3CQ99613 913 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 NCAPGQ9BPX3 1015 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 PACSIN1Q9BY11 444 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 MAGEB5Q9BZ81 275 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 MKRN2Q9H000 416 aaKnown RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 NHEJ1Q9H9Q4 299 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-205ENST00000454542 FBRSQ9HAH7 460 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 TMEM248Q9NWD8 314 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 MYO1AQ9UBC5 1043 aa14.56□□□□□ -0.08
HDAC4-205ENST00000454542 ILVBLA1L0T0 632 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 WASH4PA8MWX3 477 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 IGLV3-19P01714 112 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 EPHX1P07099 455 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 TMEM253P0C7T8 217 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 MIPP30301 263 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 ECT2LQ008S8 904 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 SIM2Q14190 667 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-205ENST00000454542 PLK5Q496M5 336 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 C6orf118Q5T5N4 469 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 LAIR1Q6GTX8 287 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 PSTKQ8IV42 348 aaKnown RBP14.55□□□□□ -0.08
HDAC4-205ENST00000454542 PYROXD2Q8N2H3 581 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 OR2T3Q8NH03 318 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 PPP1R9BQ96SB3 815 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 SNRNP25Q9BV90 132 aaKnown RBP14.55□□□□□ -0.08
HDAC4-205ENST00000454542 NUP85Q9BW27 656 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 USP36Q9P275 1121 aaKnown RBP14.55□□□□□ -0.08
HDAC4-205ENST00000454542 UVRAGQ9P2Y5 699 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 PLA2G4CQ9UP65 541 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 AP4E1Q9UPM8 1137 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 HS3ST2Q9Y278 367 aa14.55□□□□□ -0.08
HDAC4-205ENST00000454542 CXorf51AA0A1B0GTR3 108 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 ATP9BO43861 1147 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 SRGAP2O75044 1071 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 BCKDHBP21953 392 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 CDC25BP30305 580 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 STK19P49842 368 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 SLC25A11Q02978 314 aaKnown RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 PIGHQ14442 188 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 USP39Q53GS9 565 aaKnown RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 RNF219Q5W0B1 726 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 PMS2CLQ68D20 193 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 SCYL2Q6P3W7 929 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 KBTBD6Q86V97 674 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 ZNF366Q8N895 744 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 ZNF564Q8TBZ8 553 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 FRS2Q8WU20 508 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 EPAS1Q99814 870 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 DUSP15Q9H1R2 295 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-205ENST00000454542 SLC6A17Q9H1V8 727 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 DEF6Q9H4E7 631 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 CD93Q9NPY3 652 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 PRSS16Q9NQE7 514 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 SPTLC3Q9NUV7 552 aa14.54□□□□□ -0.08
HDAC4-205ENST00000454542 NDFIP2Q9NV92 336 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms