RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SMPD4Q9NXE4 827 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 POLG2Q9UHN1 485 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 CRYL1Q9Y2S2 319 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 PCDHA11Q9Y5I1 949 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 ADGRA3Q8IWK6 1321 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 EDF1O60869 148 aaKnown RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 URODP06132 367 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 CYP51A1Q16850 503 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 PCID2Q5JVF3 399 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 RETSATQ6NUM9 610 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 FAM9CQ8IZT9 166 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 POMKQ9H5K3 350 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 SORCS3Q9UPU3 1222 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 NDUFAF1Q9Y375 327 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 SAC3D1A6NKF1 404 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 M0R2N6 131 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 ZNF862O60290 1169 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 CYP1A1P04798 512 aaPredicted RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 CYP2C18P33260 490 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 TRPC1P48995 793 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 PRAMEF19Q5SWL8 479 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 MFSD5Q6N075 450 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 MOB2Q70IA6 237 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 LRRC52Q8N7C0 313 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 MTIF3Q9H2K0 278 aaKnown RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 ELOVL6Q9H5J4 265 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 RMND5AQ9H871 391 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 PCDH18Q9HCL0 1135 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 AP4S1Q9Y587 144 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 DCDC2CA8MYV0 355 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 ENTPD5O75356 428 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 ATP6V1B2P21281 511 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 FASP25445 335 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 MATKP42679 507 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 PCYT1AP49585 367 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 SERPINH1P50454 418 aaKnown RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 HIRAP54198 1017 aaPredicted RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 ARHGAP15Q53QZ3 475 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 CXCL17Q6UXB2 119 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
CTC1-202ENST00000449476 LGI2Q8N0V4 545 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 OR6Y1Q8NGX8 325 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 ACMSDQ8TDX5 336 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 EFR3BQ9Y2G0 817 aa10.6□□□□□ -0.71
CTC1-202ENST00000449476 INPP4BO15327 924 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 ERBB2P04626 1255 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 SMIM10L2AP0DMW4 78 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 SMIM10L2BP0DMW5 78 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 ITGB6P18564 788 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 S100A5P33763 92 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 GRM5P41594 1212 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 PKNOX1P55347 436 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 SLC25A3Q00325 362 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 CYP2R1Q6VVX0 501 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MON1BQ7L1V2 547 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 LRRC8DQ7L1W4 858 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 DHFR2Q86XF0 187 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 CENPLQ8N0S6 344 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 PYDC1Q8WXC3 89 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 SEPHS2Q99611 448 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 ZNF184Q99676 751 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 SH3GL1Q99961 368 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 TMEM79Q9BSE2 394 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 RNPEPQ9H4A4 650 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 LRCH4O75427 683 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 GUCA1CO95843 209 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 ASTE1Q2TB18 679 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 TREML2Q5T2D2 321 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 ARCQ7LC44 396 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 METTL6Q8TCB7 284 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 SLC25A23Q9BV35 468 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 DHX33Q9H6R0 707 aaKnown RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 SIX2Q9NPC8 291 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MARCH2Q9P0N8 246 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 KATNA1O75449 491 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 ITGA2BP08514 1039 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 FAM58BPP0C7Q3 252 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 FCGR1AP12314 374 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 SLC2A4P14672 509 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MAPK1P28482 360 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 CCNG1P51959 295 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MSLNQ13421 630 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 NOMO1Q15155 1222 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MIER2Q8N344 545 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 FNDC5Q8NAU1 212 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 NETO2Q8NC67 525 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 C18orf25Q96B23 403 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 NSMCE2Q96MF7 247 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 MBOAT7Q96N66 472 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 CDK5RAP1Q96SZ6 601 aaKnown RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 GPR20Q99678 358 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 B3GNT5Q9BYG0 378 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 PDGFDQ9GZP0 370 aaPredicted RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 PARVBQ9HBI1 364 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms