RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 THG1LQ9NWX6 298 aaKnown RBP15.02□□□□□ -0.01
TNF-208ENST00000449264 DONSONQ9NYP3 566 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 EPS15L1Q9UBC2 864 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 ZNF148Q9UQR1 794 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 NUMBLQ9Y6R0 609 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 CHD5Q8TDI0 1954 aa15.02□□□□□ -0.01
TNF-208ENST00000449264 RAMP2O60895 175 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 RHOCP08134 193 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 RBP3P10745 1247 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 ARSAP15289 507 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 CHRNA3P32297 505 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 COILP38432 576 aaPredicted RBP15.01□□□□□ -0.01
TNF-208ENST00000449264 EML3Q32P44 896 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 TEX35Q5T0J7 233 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 C6orf118Q5T5N4 469 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 FYB2Q5VWT5 728 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 BZW1Q7L1Q6 419 aaKnown RBP15.01□□□□□ -0.01
TNF-208ENST00000449264 MFSD6LQ8IWD5 586 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 ARHGAP12Q8IWW6 846 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 ATPAF2Q8N5M1 289 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 CCNYQ8ND76 341 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 SLC35B2Q8TB61 432 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 DEPDC1BQ8WUY9 529 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 LGMNQ99538 433 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 FRMD8P1Q9BZ68 369 aaPredicted RBP15.01□□□□□ -0.01
TNF-208ENST00000449264 SLC39A8Q9C0K1 460 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 NOL6Q9H6R4 1146 aaKnown RBP15.01□□□□□ -0.01
TNF-208ENST00000449264 LRRC19Q9H756 370 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
TNF-208ENST00000449264 PPP1R12AO14974 1030 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 CYP17A1P05093 508 aa15□□□□□ -0.01
TNF-208ENST00000449264 PSMC3P17980 439 aa15□□□□□ -0.01
TNF-208ENST00000449264 MX2P20592 715 aa15□□□□□ -0.01
TNF-208ENST00000449264 FNTAP49354 379 aa15□□□□□ -0.01
TNF-208ENST00000449264 TFF2Q03403 129 aa15□□□□□ -0.01
TNF-208ENST00000449264 FCHO2Q0JRZ9 810 aa15□□□□□ -0.01
TNF-208ENST00000449264 AP1B1Q10567 949 aa15□□□□□ -0.01
TNF-208ENST00000449264 POLD3Q15054 466 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 PDK1Q15118 436 aa15□□□□□ -0.01
TNF-208ENST00000449264 LEXMQ3ZCV2 418 aa15□□□□□ -0.01
TNF-208ENST00000449264 PTCRAQ6ISU1 281 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 DARS2Q6PI48 645 aaKnown RBP15□□□□□ -0.01
TNF-208ENST00000449264 CCDC117Q8IWD4 279 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 ADGRG2Q8IZP9 1017 aa15□□□□□ -0.01
TNF-208ENST00000449264 UMODL1-AS1Q8N2C9 162 aa15□□□□□ -0.01
TNF-208ENST00000449264 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
TNF-208ENST00000449264 HMCESQ96FZ2 354 aa15□□□□□ -0.01
TNF-208ENST00000449264 QKIQ96PU8 341 aaKnown RBP eCLIP15□□□□□ -0.01
TNF-208ENST00000449264 TMEM121Q9BTD3 319 aa15□□□□□ -0.01
TNF-208ENST00000449264 RPP25Q9BUL9 199 aaKnown RBP15□□□□□ -0.01
TNF-208ENST00000449264 COL4A3Q01955 1670 aa15□□□□□ -0.01
TNF-208ENST00000449264 COL6A3P12111 3177 aa15□□□□□ -0.01
TNF-208ENST00000449264 MIA3Q5JRA6 1907 aa15□□□□□ -0.01
TNF-208ENST00000449264 RASA4BC9J798 803 aa15□□□□□ -0.01
TNF-208ENST00000449264 RASA4O43374 803 aa15□□□□□ -0.01
TNF-208ENST00000449264 ECI2O75521 394 aa15□□□□□ -0.01
TNF-208ENST00000449264 NFATC1O95644 943 aa15□□□□□ -0.01
TNF-208ENST00000449264 ADH1CP00326 375 aa15□□□□□ -0.01
TNF-208ENST00000449264 ADH5P11766 374 aa15□□□□□ -0.01
TNF-208ENST00000449264 TYRP14679 529 aa15□□□□□ -0.01
TNF-208ENST00000449264 GDI1P31150 447 aa15□□□□□ -0.01
TNF-208ENST00000449264 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
TNF-208ENST00000449264 NDST2P52849 883 aa15□□□□□ -0.01
TNF-208ENST00000449264 TNK2Q07912 1038 aa15□□□□□ -0.01
TNF-208ENST00000449264 GALNT2Q10471 571 aa15□□□□□ -0.01
TNF-208ENST00000449264 HTR4Q13639 388 aa15□□□□□ -0.01
TNF-208ENST00000449264 DHCR24Q15392 516 aa15□□□□□ -0.01
TNF-208ENST00000449264 OASLQ15646 514 aaKnown RBP15□□□□□ -0.01
TNF-208ENST00000449264 FSCBQ5H9T9 825 aa15□□□□□ -0.01
TNF-208ENST00000449264 CXorf57Q6NSI4 855 aaKnown RBP15□□□□□ -0.01
TNF-208ENST00000449264 C8orf74Q6P047 294 aa15□□□□□ -0.01
TNF-208ENST00000449264 RHBDF2Q6PJF5 856 aa15□□□□□ -0.01
TNF-208ENST00000449264 ARHGAP36Q6ZRI8 547 aa15□□□□□ -0.01
TNF-208ENST00000449264 GSTA5Q7RTV2 222 aa15□□□□□ -0.01
TNF-208ENST00000449264 CDKL3Q8IVW4 592 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 KIAA1958Q8N8K9 716 aa15□□□□□ -0.01
TNF-208ENST00000449264 OR52K2Q8NGK3 314 aa15□□□□□ -0.01
TNF-208ENST00000449264 TFB1MQ8WVM0 346 aaKnown RBP15□□□□□ -0.01
TNF-208ENST00000449264 RSAD2Q8WXG1 361 aa15□□□□□ -0.01
TNF-208ENST00000449264 ATP2A3Q93084 1043 aa15□□□□□ -0.01
TNF-208ENST00000449264 NKD2Q969F2 451 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 PHF7Q9BWX1 381 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 MUC3BQ9H195 1237 aa15□□□□□ -0.01
TNF-208ENST00000449264 PRDM6Q9NQX0 595 aa15□□□□□ -0.01
TNF-208ENST00000449264 NOL12Q9UGY1 213 aaKnown RBP eCLIP15□□□□□ -0.01
TNF-208ENST00000449264 CLEC4EQ9ULY5 219 aa15□□□□□ -0.01
TNF-208ENST00000449264 RAD54BQ9Y620 910 aa15□□□□□ -0.01
TNF-208ENST00000449264 V9GYY5 206 aaPredicted RBP15□□□□□ -0.01
TNF-208ENST00000449264 TICRRQ7Z2Z1 1910 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 A0A0D9SEW6 157 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 ARHGAP42A6NI28 874 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 SGK1O00141 431 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 PENKP01210 267 aaPredicted RBP14.99□□□□□ -0.01
TNF-208ENST00000449264 ACVRL1P37023 503 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 PAPOLAP51003 745 aaKnown RBP14.99□□□□□ -0.01
TNF-208ENST00000449264 DR1Q01658 176 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 GNA12Q03113 381 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 XRCC4Q13426 336 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 PDGFRLQ15198 375 aa14.99□□□□□ -0.01
TNF-208ENST00000449264 SMAD2Q15796 467 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms