RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 CARD6Q9BX69 1037 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 BBS2Q9BXC9 721 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 EBF3Q9H4W6 596 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 HPS4Q9NQG7 708 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 PRDM6Q9NQX0 595 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 HOXC11O43248 304 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-203ENST00000449049 ADH1CP00326 375 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 IL9P15248 144 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 YBEYP58557 167 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-203ENST00000449049 XRCC4Q13426 336 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 ZNF783Q6ZMS7 281 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 MFN1Q8IWA4 741 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 TP53INP2Q8IXH6 220 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 NKD2Q969F2 451 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-203ENST00000449049 CELF6Q96J87 481 aaKnown RBP14.42□□□□□ -0.1
SHMT2-203ENST00000449049 FAM118BQ9BPY3 351 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 TRMT61BQ9BVS5 477 aaKnown RBP14.42□□□□□ -0.1
SHMT2-203ENST00000449049 SLC39A8Q9C0K1 460 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 PLK2Q9NYY3 685 aa14.42□□□□□ -0.1
SHMT2-203ENST00000449049 ILVBLA1L0T0 632 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CTAGE15A4D2H0 777 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 NEDD8-MDP1E9PL57 170 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 H0Y626 953 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 ARNTLO00327 626 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 NCAM2O15394 837 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 RAMP2O60895 175 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 MAP3K6O95382 1288 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CTAGE8P0CG41 777 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 TYRP14679 529 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 EIF3EP60228 445 aaKnown RBP14.41□□□□□ -0.1
SHMT2-203ENST00000449049 GAD2Q05329 585 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 C2orf54Q08AI8 447 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 OASLQ15646 514 aaKnown RBP14.41□□□□□ -0.1
SHMT2-203ENST00000449049 ANO4Q32M45 955 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 PARP15Q460N3 678 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CTAGE6Q86UF2 777 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CTAGE4Q8IX94 777 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CARNMT1Q8N4J0 409 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 NETO2Q8NC67 525 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 OR52K2Q8NGK3 314 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 FIBINQ8TAL6 211 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 WFDC5Q8TCV5 224 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 BHMTQ93088 406 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 DNPEPQ9ULA0 475 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 NYNRINQ9P2P1 1898 aaKnown RBP14.41□□□□□ -0.1
SHMT2-203ENST00000449049 MCF2LO15068 1137 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 RHOCP08134 193 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 ADH5P11766 374 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 MX2P20592 715 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 GDI1P31150 447 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CHRNA3P32297 505 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 GNA12Q03113 381 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CDH18Q13634 790 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 PDK1Q15118 436 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 FSCBQ5H9T9 825 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CPA6Q8N4T0 437 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 ZNF557Q8N988 423 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-203ENST00000449049 MYRIPQ8NFW9 859 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 RSAD2Q8WXG1 361 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 MAGOHBQ96A72 148 aaKnown RBP14.41□□□□□ -0.1
SHMT2-203ENST00000449049 HDAC11Q96DB2 347 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 MAGEH1Q9H213 219 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 ECT2Q9H8V3 914 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CLEC4EQ9ULY5 219 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 CHD5Q8TDI0 1954 aa14.41□□□□□ -0.1
SHMT2-203ENST00000449049 COL4A2P08572 1712 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 XIRP2A4UGR9 3374 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 OTOL1A6NHN0 477 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 HACD1B0YJ81 288 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 RASA4BC9J798 803 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 RASA4O43374 803 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 CACNG3O60359 315 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 RBP3P10745 1247 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 GARSP41250 739 aaKnown RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 FNTAP49354 379 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 TNK2Q07912 1038 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 RUNX3Q13761 415 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 BYSLQ13895 437 aaKnown RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 POLD3Q15054 466 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 GAB4Q2WGN9 574 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 ZC3H18Q86VM9 953 aaKnown RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 LRRC49Q8IUZ0 686 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 CCDC117Q8IWD4 279 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 CCDC33Q8N5R6 958 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 ARHGEF2Q92974 986 aaKnown RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 LMLNQ96KR4 655 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 QKIQ96PU8 341 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 SLC2A11Q9BYW1 496 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 BRD8Q9H0E9 1235 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 DDX47Q9H0S4 455 aaKnown RBP14.4□□□□□ -0.1
SHMT2-203ENST00000449049 KCNK12Q9HB15 430 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 EYSQ5T1H1 3165 aa14.4□□□□□ -0.1
SHMT2-203ENST00000449049 ARHGAP42A6NI28 874 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 LOC730098B7Z3J9 87 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 DFFAO00273 331 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms