RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 MAP3K6O95382 1288 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 CD70P32970 193 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 OPRD1P41143 372 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 MAPKAPK2P49137 400 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 KDSRQ06136 332 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 MESP2Q0VG99 397 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 LMAN2Q12907 356 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 RNF219Q5W0B1 726 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 SLC9A4Q6AI14 798 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 ADAT2Q7Z6V5 191 aaKnown RBP18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 CCDC117Q8IWD4 279 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 PLD5Q8N7P1 536 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 FIBINQ8TAL6 211 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 HAUS1Q96CS2 278 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 PBKQ96KB5 322 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 XPO6Q96QU8 1125 aaKnown RBP18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 NOL6Q9H6R4 1146 aaKnown RBP18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 TRPV5Q9NQA5 729 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 ABCB8Q9NUT2 735 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 NCOR1O75376 2440 aa18.47■□□□□ 0.55
TRAPPC4-203ENST00000447216 SPECC1L-ADORA2AF8WAN1 911 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 CISD3P0C7P0 127 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 MZF1P28698 734 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 ACVRL1P37023 503 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 CSKP41240 450 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 AMPD2Q01433 879 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 PFKPQ01813 784 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 GBE1Q04446 702 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 TFDP2Q14188 446 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 PAFAH1B3Q15102 231 aaKnown RBP18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 TJAP1Q5JTD0 557 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 BBS12Q6ZW61 710 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 SLC13A5Q86YT5 568 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 ARHGAP12Q8IWW6 846 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 OR7D4Q8NG98 312 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 LMLNQ96KR4 655 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 SAE1Q9UBE0 346 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 FBXO10Q9UK96 956 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 TBC1D30Q9Y2I9 924 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 HEY1Q9Y5J3 304 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 PIAS3Q9Y6X2 628 aa18.46■□□□□ 0.55
TRAPPC4-203ENST00000447216 A0A0D9SEW6 157 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 KIF2AO00139 706 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 ZNF500O60304 480 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 PECAM1P16284 738 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 TCP1P17987 556 aaKnown RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 HLA-FP30511 346 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 CTHP32929 405 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 DGKGP49619 791 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 SLC10A2Q12908 348 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 C6orf118Q5T5N4 469 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 CCDC181Q5TID7 509 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 GRAMD4Q6IC98 578 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 TXNDC11Q6PKC3 985 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 SETD3Q86TU7 594 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 APCDD1Q8J025 514 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 UMODL1-AS1Q8N2C9 162 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 LRRN4Q8WUT4 740 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 CAPZA3Q96KX2 299 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 FAM118BQ9BPY3 351 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 SLC2A11Q9BYW1 496 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 SLC39A8Q9C0K1 460 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 KIAA1522Q9P206 1035 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 MUTYHQ9UIF7 546 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 GGA2Q9UJY4 613 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 CA14Q9ULX7 337 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 SAR1BQ9Y6B6 198 aa18.45■□□□□ 0.54
TRAPPC4-203ENST00000447216 ILVBLA1L0T0 632 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 RASA4BC9J798 803 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 DFFAO00273 331 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 RASA4O43374 803 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 RAMP2O60895 175 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 FGGP02679 453 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 PABPC1P11940 636 aaKnown RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 ZFXP17010 805 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 GNA12Q03113 381 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 POLD3Q15054 466 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 GEN1Q17RS7 908 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 SLC44A4Q53GD3 710 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 AFMIDQ63HM1 303 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 SFTPA1Q8IWL2 248 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 PHTF2Q8N3S3 785 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 RASGEF1CQ8N431 466 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 HMCESQ96FZ2 354 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 SPON2Q9BUD6 331 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 MUC3BQ9H195 1237 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 RETREG1Q9H6L5 497 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 LRRC19Q9H756 370 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 C8orf33Q9H7E9 229 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 FBRSL1Q9HCM7 1045 aaKnown RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 DTLQ9NZJ0 730 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 DEC1Q9P2X7 70 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 INTS6Q9UL03 887 aaKnown RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 EFR3BQ9Y2G0 817 aa18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 R3HDM2Q9Y2K5 976 aaKnown RBP18.44■□□□□ 0.54
TRAPPC4-203ENST00000447216 TRIOO75962 3097 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 TJP3O95049 919 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 TUBB4AP04350 444 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 PRLRP16471 622 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms