RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CCDC85CA6NKD9 419 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 GRXCR1A8MXD5 290 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 C5orf67F2Z3F1 127 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 DCLK1O15075 740 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 MFSD11O43934 449 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 DNAJC8O75937 253 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 GLUD1P00367 558 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 LRG1P02750 347 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ZSCAN5DPP0CG00 497 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 SRGAP2BP0DMP2 458 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 MYOGP15173 224 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 SERPINB6P35237 376 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 MLLT6P55198 1093 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 PHEXP78562 749 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 CAV1Q03135 178 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 SLC10A2Q12908 348 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 GPS1Q13098 491 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 E2F5Q15329 346 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 SHHQ15465 462 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 P3H1Q32P28 736 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 SLC45A4Q5BKX6 768 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 RWDD4Q6NW29 188 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 KLHDC10Q6PID8 442 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 PRUNE1Q86TP1 453 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 KREMEN2Q8NCW0 462 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ART4Q93070 314 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 BTN2A3PQ96KV6 586 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ANAPC5Q9UJX4 755 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ATP8A1Q9Y2Q0 1164 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 HBS1LQ9Y450 684 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 MFHAS1Q9Y4C4 1052 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 PTPRSQ13332 1948 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 C2orf71A6NGG8 1288 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 HIDE1A8MVS5 230 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 NDC80O14777 642 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 KCNN4O15554 427 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ATP6V1G2O95670 118 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 C8AP07357 584 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 CA3P07451 260 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 HMBSP08397 361 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ETS1P14921 441 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 RBL1P28749 1068 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 GDF10P55107 478 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 GNGT1P63211 74 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 PDK1Q15118 436 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 CLPPQ16740 277 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 IZUMO3Q5VZ72 239 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 FAM109BQ6ICB4 259 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 GET4Q7L5D6 327 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 TEX9Q8N6V9 391 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 TBC1D31Q96DN5 1066 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 C1orf74Q96LT6 269 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 SAMD11Q96NU1 681 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 FERMT1Q9BQL6 677 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 BRD8Q9H0E9 1235 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 XPO7Q9UIA9 1087 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 HACD1B0YJ81 288 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 FGF10O15520 208 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 LUC7L3O95232 432 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 IGLV3-27P01718 113 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 DNAJB1P25685 340 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 TUBP50607 506 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 ITGA8P53708 1063 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 COG7P83436 770 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 HEATR6Q6AI08 1181 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 TFB1MQ8WVM0 346 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 OLFM3Q96PB7 478 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 QKIQ96PU8 341 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 TGS1Q96RS0 853 aaKnown RBP8.3□□□□□ -1.08
CCDC39-201ENST00000442201 CATSPERBQ9H7T0 1116 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 USP29Q9HBJ7 922 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 RAD54BQ9Y620 910 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 HS3ST4Q9Y661 456 aa8.3□□□□□ -1.08
CCDC39-201ENST00000442201 NDUFAB1O14561 156 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 DNALI1O14645 258 aaPredicted RBP8.29□□□□□ -1.08
CCDC39-201ENST00000442201 GRM6O15303 877 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 NCAM2O15394 837 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 COCHO43405 550 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 VIMP08670 466 aaKnown RBP8.29□□□□□ -1.08
CCDC39-201ENST00000442201 RPL22P35268 128 aaKnown RBP8.29□□□□□ -1.08
CCDC39-201ENST00000442201 MANEALQ5VSG8 457 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 SPRED2Q7Z698 418 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 ELMOD1Q8N336 334 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 MREGQ8N565 214 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 CCNYQ8ND76 341 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 LZICQ8WZA0 190 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 PCDHA11Q9Y5I1 949 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 GOLGA8KD6RF30 607 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 E9PAM4 449 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 ZNF189O75820 626 aaPredicted RBP8.29□□□□□ -1.08
CCDC39-201ENST00000442201 ALADP13716 330 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 MX2P20592 715 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 HOXC13P31276 330 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 HSPA9P38646 679 aaKnown RBP8.29□□□□□ -1.08
CCDC39-201ENST00000442201 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
CCDC39-201ENST00000442201 PIK3R6Q5UE93 754 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms