RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TSR3Q9UJK0 312 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-202ENST00000439374 TNFSF13BQ9Y275 285 aa10.17□□□□□ -0.78
CDC42SE1-202ENST00000439374 FNDC3AQ9Y2H6 1198 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-202ENST00000439374 SNX10Q9Y5X0 201 aa10.17□□□□□ -0.78
CDC42SE1-202ENST00000439374 A0A0J9YVX5 310 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATP6AP2A0A1C7CYW4 349 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ADCY6O43306 1168 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 HUS1O60921 280 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATP6AP2O75787 350 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATG7O95352 703 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 METTL18O95568 372 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CHRNGP07510 517 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PTPN1P18031 435 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 FDFT1P37268 417 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF143P52747 638 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAP3K7CLP57077 242 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ADIGQ0VDE8 80 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CBX3Q13185 183 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRPSAP1Q14558 356 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CCDC14Q49A88 953 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MTX3Q5HYI7 312 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 GRAMD4Q6IC98 578 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 DUS1LQ6P1R4 473 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRR23BQ6ZRT6 265 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PSD4Q8NDX1 1056 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 BEST2Q8NFU1 509 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PCDH19Q8TAB3 1148 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC45A3Q96JT2 553 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 FAM192AQ9GZU8 254 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 RMI1Q9H9A7 625 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 GTSE1Q9NYZ3 720 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF112Q9UJU3 913 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 DRG1Q9Y295 367 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SSX2IPQ9Y2D8 614 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TMA7Q9Y2S6 64 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 COMMD3-BMI1R4GMX3 469 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TMEM233B4DJY2 109 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAGEB2O15479 319 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PHGDHO43175 533 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 B4GALT4O60513 344 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TMCC1O94876 653 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CRTAMO95727 393 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CYP3A5P20815 502 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAGP20916 626 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CXCR3P49682 368 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 HDAC4P56524 1084 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MRPS5P82675 430 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 POU5F1BQ06416 359 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 GPR162Q16538 588 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ANKRD20A4Q4UJ75 823 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MFSD4BQ5TF39 518 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TRNP1Q6NT89 227 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TTC30AQ86WT1 665 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PDSS2Q86YH6 399 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 DEFB106AQ8N104 65 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 METTL25Q8N6Q8 603 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CCDC185Q8N715 623 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF781Q8N8C0 355 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 GIPC3Q8TF64 312 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 CYGBQ8WWM9 190 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLCO2A1Q92959 643 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 NKD2Q969F2 451 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 C12orf42Q96LP6 360 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZMAT2Q96NC0 199 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 OR52B2Q96RD2 323 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TMEM79Q9BSE2 394 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 FZD8Q9H461 694 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PDHXO00330 501 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PAPSS1O43252 624 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PARNO95453 639 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC25A27O95847 323 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 MGAT1P26572 445 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 THOP1P52888 689 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 LSAMPQ13449 338 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC9B1Q4ZJI4 515 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 RARS2Q5T160 578 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 OGFOD2Q6N063 350 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ACAD11Q709F0 780 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATP6V1E2Q96A05 226 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 THAP11Q96EK4 314 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATXN3LQ9H3M9 355 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PCDH18Q9HCL0 1135 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PCDH12Q9NPG4 1184 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 EURLQ9NYK6 297 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 SELENONQ9NZV5 590 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 PLLPQ9Y342 182 aa10.16□□□□□ -0.78
CDC42SE1-202ENST00000439374 ATP8B3O60423 1300 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 EVPLQ92817 2033 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ASB14A6NK59 587 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZBTB42B2RXF5 422 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 AKAP10O43572 662 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAN1A2O60476 641 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 C22orf31O95567 290 aa10.15□□□□□ -0.78
CDC42SE1-202ENST00000439374 ABHD2P08910 425 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms