RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 OSBPL2Q9H1P3 480 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 SLC6A17Q9H1V8 727 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 ARRDC1-AS1Q9H2J1 176 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 TMPRSS4Q9NRS4 437 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 MBD1Q9UIS9 605 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-207ENST00000435455 SNX10Q9Y5X0 201 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 IGHV1OR15-9A0A0B4J2B8 117 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 AP5Z1O43299 807 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 CCP110O43303 1012 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 SRGAP2O75044 1071 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 CNTN5O94779 1100 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 RHOCP08134 193 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 ACADMP11310 421 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 TGM1P22735 817 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 MZF1P28698 734 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-207ENST00000435455 NNMTP40261 264 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 COPAP53621 1224 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 HDAC4P56524 1084 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 RPL7AP62424 266 aaKnown RBP16.72■□□□□ 0.27
SMPD4-207ENST00000435455 HNRNPA1L2Q32P51 320 aaKnown RBP16.72■□□□□ 0.27
SMPD4-207ENST00000435455 RAB6CQ53S08 254 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 SPECC1LQ69YQ0 1117 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 CYP2U1Q7Z449 544 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 SETD3Q86TU7 594 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF366Q8N895 744 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 NTAN1Q96AB6 310 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 MYO19Q96H55 970 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 FEM1AQ9BSK4 669 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 ZYG11BQ9C0D3 744 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 RAB6CQ9H0N0 254 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 RETREG1Q9H6L5 497 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 PARD6AQ9NPB6 346 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 PRSS16Q9NQE7 514 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 SEMA4GQ9NTN9 838 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 USP36Q9P275 1121 aaKnown RBP16.72■□□□□ 0.27
SMPD4-207ENST00000435455 PPARGC1AQ9UBK2 798 aaKnown RBP16.72■□□□□ 0.27
SMPD4-207ENST00000435455 OR12D3Q9UGF7 316 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 VPS28Q9UK41 221 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 CYP8B1Q9UNU6 501 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 SCINQ9Y6U3 715 aa16.72■□□□□ 0.27
SMPD4-207ENST00000435455 EDDM13A0A1B0GTR0 161 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 BCLAF3A2AJT9 711 aaKnown RBP16.71■□□□□ 0.27
SMPD4-207ENST00000435455 TPM1P09493 284 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 MYBL1P10243 752 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 C7P10643 843 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 OXTRP30559 389 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 CASP14P31944 242 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 MPLP40238 635 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 CTSOP43234 321 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-207ENST00000435455 DHPSP49366 369 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-207ENST00000435455 VASPP50552 380 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-207ENST00000435455 RPL6Q02878 288 aaKnown RBP16.71■□□□□ 0.27
SMPD4-207ENST00000435455 CREB5Q02930 508 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 LMNB2Q03252 620 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 SCAPQ12770 1279 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 MAMLD1Q13495 774 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 ALFQ53S48 1182 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 FRMD1Q8N878 549 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF653Q96CK0 615 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 ALG14Q96F25 216 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 C2orf49Q9BVC5 232 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-207ENST00000435455 MUC3BQ9H195 1237 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 ISCUQ9H1K1 167 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 ITM2CQ9NQX7 267 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 SLC25A13Q9UJS0 675 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 OR51B4Q9Y5P0 310 aa16.71■□□□□ 0.27
SMPD4-207ENST00000435455 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 NYNRINQ9P2P1 1898 aaKnown RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 PRR5-ARHGAP8B1AHC4 643 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 RNASEH1O60930 286 aaKnown RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 NDUFS2O75306 463 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 PLEKP08567 350 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ZNF806P0C7X5 589 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 OR1E1P30953 314 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 DPP6P42658 865 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 AIF1P55008 147 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 KRT83P78385 493 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ARHGAP8P85298 464 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ZBTB16Q05516 673 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 PLA2G2CQ5R387 149 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 C6orf118Q5T5N4 469 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 MANEALQ5VSG8 457 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ZNF776Q68DI1 518 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 TMC6Q7Z403 805 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 TFAP2DQ7Z6R9 452 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 SLFN11Q7Z7L1 901 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 DRC7Q8IY82 874 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 TMEFF1Q8IYR6 380 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 OR52K2Q8NGK3 314 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 RPL10LQ96L21 214 aaKnown RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 CNOT8Q9UFF9 292 aaKnown RBP16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 SLCO3A1Q9UIG8 710 aa16.7■□□□□ 0.26
SMPD4-207ENST00000435455 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms