RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 RPS6KA2Q15349 733 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 GPR162Q16538 588 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 TBRG1Q3YBR2 411 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 ENTPD8Q5MY95 495 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 ASPHD1Q5U4P2 390 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 NFRKBQ6P4R8 1299 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 RINLQ6ZS11 566 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 RAB11FIP2Q7L804 512 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 KDELC2Q7Z4H8 507 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 MORC1Q86VD1 984 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 IGFN1Q86VF2 1251 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 CCDC25Q86WR0 208 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 EID2BQ96D98 161 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 CAMK1GQ96NX5 476 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 TMEM204Q9BSN7 226 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 HERC5Q9UII4 1024 aaKnown RBP3.73□□□□□ -1.81
CLK1-204ENST00000432425 DTX4Q9Y2E6 619 aa3.73□□□□□ -1.81
CLK1-204ENST00000432425 SYT5O00445 386 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 TNFRSF13BO14836 293 aaPredicted RBP3.72□□□□□ -1.81
CLK1-204ENST00000432425 ACTL6BO94805 426 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 KLKB1P03952 638 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 GYS1P13807 737 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 PFKFB4Q16877 469 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 ZACNQ401N2 412 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 KLHL22Q53GT1 634 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 SYCP2LQ5T4T6 812 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 KLHL17Q6TDP4 642 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 PARM1Q6UWI2 310 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 TOGARAM2Q6ZUX3 1019 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 RTL10Q7L3V2 364 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 ENDOVQ8N8Q3 282 aaKnown RBP3.72□□□□□ -1.81
CLK1-204ENST00000432425 ZPBPQ9BS86 351 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.72□□□□□ -1.81
CLK1-204ENST00000432425 WDR12Q9GZL7 423 aaKnown RBP3.72□□□□□ -1.81
CLK1-204ENST00000432425 ZNF700Q9H0M5 742 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 ISCUQ9H1K1 167 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 ELAC1Q9H777 363 aaKnown RBP3.72□□□□□ -1.81
CLK1-204ENST00000432425 MAP6D1Q9H9H5 199 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 CHST12Q9NRB3 414 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 RNF146Q9NTX7 359 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 ARL15Q9NXU5 204 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 WWOXQ9NZC7 414 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 TBC1D14Q9P2M4 693 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 SLC25A13Q9UJS0 675 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 PCDHA10Q9Y5I2 948 aa3.72□□□□□ -1.81
CLK1-204ENST00000432425 SERPINB3P29508 390 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 SLC16A2P36021 539 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 CDK7P50613 346 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 OAZ1P54368 228 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 AP2B1P63010 937 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 ICA1Q05084 483 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 PUM3Q15397 648 aaKnown RBP3.71□□□□□ -1.81
CLK1-204ENST00000432425 WASHC2DQ5SRD0 308 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 PDXDC1Q6P996 788 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 TMEM200AQ86VY9 491 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 CCDC117Q8IWD4 279 aaPredicted RBP3.71□□□□□ -1.81
CLK1-204ENST00000432425 FAM185AQ8N0U4 392 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 FBXL14Q8N1E6 418 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 SLC25A41Q8N5S1 370 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 ATG16L2Q8NAA4 619 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 C7orf57Q8NEG2 295 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 B4GALNT2Q8NHY0 566 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 CPT1BQ92523 772 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 INPP5DQ92835 1189 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 PDE11AQ9HCR9 933 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 KRCC1Q9NPI7 259 aaPredicted RBP3.71□□□□□ -1.81
CLK1-204ENST00000432425 SIRT3Q9NTG7 399 aaPredicted RBP3.71□□□□□ -1.81
CLK1-204ENST00000432425 LRFN1Q9P244 771 aa3.71□□□□□ -1.81
CLK1-204ENST00000432425 C19orf53Q9UNZ5 99 aaPredicted RBP3.71□□□□□ -1.81
CLK1-204ENST00000432425 NGFRP08138 427 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 PDIA3P30101 505 aaKnown RBP3.71□□□□□ -1.82
CLK1-204ENST00000432425 Q5PR19 223 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 AAGABQ6PD74 315 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 SLC30A9Q6PML9 568 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 GPSM1Q86YR5 675 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 SLC44A2Q8IWA5 706 aaPredicted RBP3.71□□□□□ -1.82
CLK1-204ENST00000432425 DPP10Q8N608 796 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 OR1N1Q8NGS0 311 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 OIT3Q8WWZ8 545 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 C3orf49Q96BT1 292 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 NTPCRQ9BSD7 190 aaKnown RBP3.71□□□□□ -1.82
CLK1-204ENST00000432425 MYLK2Q9H1R3 596 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 IL21RQ9HBE5 538 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 ZNF304Q9HCX3 659 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 PNRC2Q9NPJ4 139 aaKnown RBP3.71□□□□□ -1.82
CLK1-204ENST00000432425 HIF1ANQ9NWT6 349 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 NDUFAF4Q9P032 175 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 BAG5Q9UL15 447 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 PKP3Q9Y446 797 aa3.71□□□□□ -1.82
CLK1-204ENST00000432425 ABHD14A-ACY1A0A1B0GW23 586 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 CYP1A2P05177 515 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 CPA1P15085 419 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 HOXB9P17482 250 aaPredicted RBP3.7□□□□□ -1.82
CLK1-204ENST00000432425 KLRC2P26717 231 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 SERPINA4P29622 427 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 ARRB2P32121 409 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 SERPINF1P36955 418 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 MLH1P40692 756 aa3.7□□□□□ -1.82
CLK1-204ENST00000432425 HTR3AP46098 478 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms