RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TCF4P15884 667 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 POLR2EP19388 210 aaKnown RBP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 CD70P32970 193 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 GGCXP38435 758 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 ARL4AP40617 200 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 NDST2P52849 883 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 TAS2R40P59535 323 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 TPI1P60174 286 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 KDSRQ06136 332 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 PITRM1Q5JRX3 1037 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 TMEM215Q68D42 235 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 MBLAC2Q68D91 279 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 RWDD4Q6NW29 188 aaKnown RBP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 RFX8Q6ZV50 586 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 SYT13Q7L8C5 426 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 TMEM105Q8N8V8 129 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 LRRC57Q8N9N7 239 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 WFDC5Q8TCV5 224 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 KCTD15Q96SI1 283 aaPredicted RBP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 KCNH6Q9H252 994 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 PCDH18Q9HCL0 1135 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 CWC15Q9P013 229 aaKnown RBP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 INTS6Q9UL03 887 aaKnown RBP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 TFR2Q9UP52 801 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 PLA2G4CQ9UP65 541 aa15.36■□□□□ 0.05
GARNL3-204ENST00000429629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.36■□□□□ 0.05
GARNL3-204ENST00000429629 SPOPO43791 374 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 RNF40O75150 1001 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 DCNP07585 359 aaKnown RBP15.35■□□□□ 0.05
GARNL3-204ENST00000429629 RHOCP08134 193 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 IL4RP24394 825 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 NTSR1P30989 418 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 SSR1P43307 286 aaKnown RBP15.35■□□□□ 0.05
GARNL3-204ENST00000429629 IRAK1P51617 712 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 CCR3P51677 355 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 DPYSQ14117 519 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 PARP15Q460N3 678 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 EOGTQ5NDL2 527 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 SDE2Q6IQ49 451 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 DAAM2Q86T65 1068 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 LRRC49Q8IUZ0 686 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 IL17RCQ8NAC3 791 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 DTWD2Q8NBA8 298 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 KCTD6Q8NC69 237 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 FAF2Q96CS3 445 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 GABRG3Q99928 467 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 ZNF670Q9BS34 389 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 C2orf49Q9BVC5 232 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-204ENST00000429629 ACE2Q9BYF1 805 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-204ENST00000429629 GPATCH2LQ9NWQ4 482 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 HCN2Q9UL51 889 aa15.35■□□□□ 0.05
GARNL3-204ENST00000429629 CCDC66A2RUB6 948 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 DAPK3O43293 454 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 BUB1O43683 1085 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 GOT1P17174 413 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 CSKP41240 450 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 CXCL12P48061 93 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
GARNL3-204ENST00000429629 CDH6P55285 790 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 ECT2LQ008S8 904 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 GNA12Q03113 381 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 GAS6Q14393 721 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 SMTNL2Q2TAL5 461 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 FUT11Q495W5 492 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
GARNL3-204ENST00000429629 DAB2IPQ5VWQ8 1189 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 RNF219Q5W0B1 726 aaPredicted RBP15.34■□□□□ 0.05
GARNL3-204ENST00000429629 CIR1Q86X95 450 aaPredicted RBP15.34■□□□□ 0.05
GARNL3-204ENST00000429629 C1orf210Q8IVY1 113 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 CAMKK1Q8N5S9 505 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 ZNF513Q8N8E2 541 aaPredicted RBP15.34■□□□□ 0.05
GARNL3-204ENST00000429629 DCAF4L2Q8NA75 395 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 HSPH1Q92598 858 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 CSPG4P5Q96PW8 444 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 TMEM245Q9H330 911 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
GARNL3-204ENST00000429629 FBXO4Q9UKT5 387 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 MMP17Q9ULZ9 603 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 PPP2R2CQ9Y2T4 447 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 PCDHA3Q9Y5H8 950 aa15.34■□□□□ 0.05
GARNL3-204ENST00000429629 GRID2IPA4D2P6 1211 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 FAM86C2PA6NEL3 165 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 ZSCAN5CA6NGD5 496 aaPredicted RBP15.33■□□□□ 0.04
GARNL3-204ENST00000429629 TMEM110-MUSTN1A8MSY1 372 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 MIF4GDA9UHW6 222 aaKnown RBP15.33■□□□□ 0.04
GARNL3-204ENST00000429629 DCLK1O15075 740 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 ZSCAN12O43309 604 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 RAMP2O60895 175 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 ERCC2P18074 760 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 KDELR1P24390 212 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 MZF1P28698 734 aaPredicted RBP15.33■□□□□ 0.04
GARNL3-204ENST00000429629 MTAPQ13126 283 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 KRT81Q14533 505 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 POLD3Q15054 466 aaPredicted RBP15.33■□□□□ 0.04
GARNL3-204ENST00000429629 TAZQ16635 292 aa15.33■□□□□ 0.04
GARNL3-204ENST00000429629 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms