RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ELFN1P0C7U0 828 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 PRR23CQ6ZRP0 262 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 C12orf56Q8IXR9 622 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TACO1Q9BSH4 297 aaKnown RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 IL22Q9GZX6 179 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 GNPTGQ9UJJ9 305 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TRPC5OSA6NMA1 111 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 A8MX80 341 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 MAGEC1O60732 1142 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 ATP4AP20648 1035 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 LILRA4P59901 499 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 KCNT2Q6UVM3 1135 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 OR5B17Q8NGF7 314 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 ISCUQ9H1K1 167 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 POLMQ9NP87 494 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 ZDHHC4Q9NPG8 344 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 MLNP12872 115 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 MAMLD1Q13495 774 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 UBXN2BQ14CS0 331 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 SOHLH2Q9NX45 425 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 CTNNAL1Q9UBT7 734 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 DTNAQ9Y4J8 743 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 WNK3Q9BYP7 1800 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 NID2Q14112 1375 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 DAB1O75553 588 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 FSHRP23945 695 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 CD86P42081 329 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 LRRC8EQ6NSJ5 796 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 RBM43Q6ZSC3 357 aaKnown RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 SYTL1Q8IYJ3 562 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 FAM136AQ96C01 138 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 NDOR1Q9UHB4 597 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 ASB3Q9Y575 518 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 MGAT4DA6NG13 374 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 CASP10Q92851 521 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 PLD4Q96BZ4 506 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 CAPN10Q9HC96 672 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 MIEF1Q9NQG6 463 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 LAMB2P55268 1798 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 ZBTB14O43829 449 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 TKTP29401 623 aaKnown RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 PRPF39Q86UA1 669 aaKnown RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 JADE3Q92613 823 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 GPAMQ9HCL2 828 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 PCDHA3Q9Y5H8 950 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 DOCK1Q14185 1865 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 CLDN11O75508 207 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 BAIAP3O94812 1187 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 GNSP15586 552 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 GPC1P35052 558 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 CHI3L1P36222 383 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 SLC5A3P53794 718 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 TRIM68Q6AZZ1 485 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 FAM228AQ86W67 206 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 ALG13Q9NP73 1137 aaKnown RBP10.95□□□□□ -0.66
PTCH1-206ENST00000421141 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
PTCH1-206ENST00000421141 TPBGLP0DKB5 382 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 DDX39BQ13838 428 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 LRIG3Q6UXM1 1119 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KCNMB4Q86W47 210 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 E2F7Q96AV8 911 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 MTMR8Q96EF0 704 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 VPS50Q96JG6 964 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 PRMT1Q99873 361 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 NDRG2Q9UN36 371 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 GNG14A0A1W2PPG7 69 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 ERI2A8K979 691 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 APOC2P02655 101 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 FOXR2Q6PJQ5 311 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 FBXO36Q8NEA4 188 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 IRGQQ8WZA9 623 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 CXorf40BQ96DE9 158 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 TM6SF2Q9BZW4 377 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 LHX5Q9H2C1 402 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 SFMBT1Q9UHJ3 866 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 STARD13Q9Y3M8 1113 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 IRS2Q9Y4H2 1338 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 HSPA1AP0DMV8 641 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 HSPA1BP0DMV9 641 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 C15orf59Q2T9L4 293 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KRT80Q6KB66 452 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 FLCNQ8NFG4 579 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 C17orf80Q9BSJ5 609 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KRCC1Q9NPI7 259 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 CHCHD3Q9NX63 227 aaKnown RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 TCP11X1B4DZS4 312 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KCNK1O00180 336 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 KATNAL2Q8IYT4 538 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 SGSM3Q96HU1 749 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 GID8Q9NWU2 228 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 RAD54BQ9Y620 910 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 IGLV3-22A0A075B6J6 115 aa10.94□□□□□ -0.66
PTCH1-206ENST00000421141 ZSCAN9O15535 394 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-206ENST00000421141 C1RP00736 705 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms