RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 NUCKS1Q9H1E3 243 aaKnown RBP15.92■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3DA0A087WVF3 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3IA0A087WXS9 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3EA0A087X179 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3KA0A087X1G2 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 A0A1W2PQ27 194 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 A0A1W2PQ64 194 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3FA6NER0 549 aaPredicted RBP15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3LB9A6J9 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 RNF225M0QZC1 329 aaPredicted RBP15.91■□□□□ 0.14
DDX56-202ENST00000415758 PIK3R2O00459 728 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 SLC7A4O43246 635 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 MAGEC1O60732 1142 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 ZNF202O95125 648 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3HP0C7X1 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 ACP1P24666 158 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 MZF1P28698 734 aaPredicted RBP15.91■□□□□ 0.14
DDX56-202ENST00000415758 PSMD8P48556 350 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
DDX56-202ENST00000415758 PLK1P53350 603 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 KRT85P78386 507 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 SLC12A1Q13621 1099 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3GQ6DHY5 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3CQ6IPX1 549 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 TBC1D3Q8IZP1 549 aaPredicted RBP15.91■□□□□ 0.14
DDX56-202ENST00000415758 APCDD1Q8J025 514 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 DCBLD1Q8N8Z6 715 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 DMTF1Q9Y222 760 aa15.91■□□□□ 0.14
DDX56-202ENST00000415758 DOCK9Q9BZ29 2069 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 TEX51A0A1B0GUA7 166 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 M0QYV0 167 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 IL1BP01584 269 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
DDX56-202ENST00000415758 NNMTP40261 264 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 PRCPP42785 496 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 PPP2CBP62714 309 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 PPP2CAP67775 309 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 LRMPQ12912 555 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 PROX2Q3B8N5 592 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 RNF219Q5W0B1 726 aaPredicted RBP15.9■□□□□ 0.14
DDX56-202ENST00000415758 ANKRD40Q6AI12 368 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 GPR155Q7Z3F1 870 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 PRPF39Q86UA1 669 aaKnown RBP15.9■□□□□ 0.14
DDX56-202ENST00000415758 HSCBQ8IWL3 235 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 FRS2Q8WU20 508 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 RPL10LQ96L21 214 aaKnown RBP15.9■□□□□ 0.14
DDX56-202ENST00000415758 FCRL3Q96P31 734 aaPredicted RBP15.9■□□□□ 0.14
DDX56-202ENST00000415758 ARMCX3Q9UH62 379 aaPredicted RBP15.9■□□□□ 0.14
DDX56-202ENST00000415758 CYTH4Q9UIA0 394 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 CLCA2Q9UQC9 943 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 NAALADL1Q9UQQ1 740 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 CFAP46Q8IYW2 2715 aa15.9■□□□□ 0.14
DDX56-202ENST00000415758 SART1O43290 800 aaKnown RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 PLRG1O43660 514 aaKnown RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 ZIC2O95409 532 aaPredicted RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 GLDCP23378 1020 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 ACTN2P35609 894 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 GPD2P43304 727 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 E2F1Q01094 437 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 INSM1Q01101 510 aaPredicted RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 SULT2A1Q06520 285 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 ZNF211Q13398 564 aaPredicted RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 EIF4EBP2Q13542 120 aaPredicted RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 TRIM69Q86WT6 500 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 LGI2Q8N0V4 545 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 BTN2A3PQ96KV6 586 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 SPAG5Q96R06 1193 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 TSG101Q99816 390 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 MIS12Q9H081 205 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 GOLPH3LQ9H4A5 285 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 XPO7Q9UIA9 1087 aaKnown RBP15.89■□□□□ 0.13
DDX56-202ENST00000415758 CEP83Q9Y592 693 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 PCDHB4Q9Y5E5 795 aa15.89■□□□□ 0.13
DDX56-202ENST00000415758 MGAQ8IWI9 3026 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 BRINP1O60477 761 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 IGLV3-25P01717 112 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 TACR2P21452 398 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 BRD2P25440 801 aaKnown RBP15.88■□□□□ 0.13
DDX56-202ENST00000415758 FMO5P49326 533 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 STK19P49842 368 aaPredicted RBP15.88■□□□□ 0.13
DDX56-202ENST00000415758 PMS1P54277 932 aaKnown RBP15.88■□□□□ 0.13
DDX56-202ENST00000415758 TLE3Q04726 772 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 LRRC63Q05C16 580 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 TBC1D25Q3MII6 688 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 ZNF658Q5TYW1 1059 aaPredicted RBP15.88■□□□□ 0.13
DDX56-202ENST00000415758 SYPL2Q5VXT5 272 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 TAC4Q86UU9 113 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 ERICH1Q86X53 443 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 ZNF843Q8N446 348 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 LMO3Q8TAP4 145 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 COL26A1Q96A83 441 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 CCDC34Q96HJ3 373 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 NT5C1BQ96P26 610 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 TRIM62Q9BVG3 475 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 METTL14Q9HCE5 456 aaKnown RBP15.88■□□□□ 0.13
DDX56-202ENST00000415758 RMND1Q9NWS8 449 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 TJP2Q9UDY2 1190 aa15.88■□□□□ 0.13
DDX56-202ENST00000415758 PRAMEF26H0Y7S4 382 aa15.87■□□□□ 0.13
DDX56-202ENST00000415758 CAPN9O14815 690 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms