RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 RBP3P10745 1247 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 PSMC3P17980 439 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 IFNAR2P48551 515 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 OXCT1P55809 520 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 LMNB2Q03252 620 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 C2orf54Q08AI8 447 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 HTR4Q13639 388 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 PRKD1Q15139 912 aaPredicted RBP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 DHCR24Q15392 516 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 SLC45A4Q5BKX6 768 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 LY6G5CQ5SRR4 150 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 CXorf57Q6NSI4 855 aaKnown RBP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 CCDC137Q6PK04 289 aaKnown RBP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 ZNF557Q8N988 423 aaPredicted RBP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 NOA1Q8NC60 698 aaKnown RBP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 FIBINQ8TAL6 211 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 DDI1Q8WTU0 396 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 PPM1EQ8WY54 764 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 FGF14Q92915 247 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 ATP2A3Q93084 1043 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 FATE1Q969F0 183 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 NXPE3Q969Y0 559 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 HDAC11Q96DB2 347 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 ASIC4Q96FT7 647 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 QKIQ96PU8 341 aaKnown RBP eCLIP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 KRT12Q99456 494 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 SLC2A11Q9BYW1 496 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 PLA2G2FQ9BZM2 168 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 DDX47Q9H0S4 455 aaKnown RBP14.62□□□□□ -0.07
SF3B1-204ENST00000414963 DOCK8Q8NF50 2099 aa14.62□□□□□ -0.07
SF3B1-204ENST00000414963 ARHGAP42A6NI28 874 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 EFCAB8A8MWE9 144 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 RASA4BC9J798 803 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 PPP1R12AO14974 1030 aaPredicted RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 CHADO15335 359 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 RASA4O43374 803 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 RAMP2O60895 175 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 NFATC1O95644 943 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 ADH1CP00326 375 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 CYP17A1P05093 508 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 STIP1P31948 543 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 ETFBP38117 255 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 GARSP41250 739 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 PTGIRP43119 386 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 GNA12Q03113 381 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 PPIDQ08752 370 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 SNX1Q13596 522 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 DHX34Q14147 1143 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 POLD3Q15054 466 aaPredicted RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 GLE1Q53GS7 698 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 TPGS1Q6ZTW0 290 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 MAATS1Q7Z4T9 603 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 CDKL3Q8IVW4 592 aaPredicted RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 TP53INP2Q8IXH6 220 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 KLHL7Q8IXQ5 586 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 LRRN4CLQ8ND94 238 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 CCDC26Q8TAB7 109 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 TFB1MQ8WVM0 346 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 ARHGEF2Q92974 986 aaKnown RBP14.61□□□□□ -0.07
SF3B1-204ENST00000414963 LMLNQ96KR4 655 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 FAM118BQ9BPY3 351 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 USP29Q9HBJ7 922 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 FBXO10Q9UK96 956 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 ZNF148Q9UQR1 794 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 FAM50BQ9Y247 325 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 NEU2Q9Y3R4 380 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 OR51B4Q9Y5P0 310 aa14.61□□□□□ -0.07
SF3B1-204ENST00000414963 DOCK4Q8N1I0 1966 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 CFAP69A5D8W1 941 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 C2CD4DB7Z1M9 353 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 H0Y626 953 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 H7C0C1 242 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 MTSS1O43312 755 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 MAFKO60675 156 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 CCNCP24863 283 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 ATP5OP48047 213 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 KCNJ1P48048 391 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 PAPOLAP51003 745 aaKnown RBP14.6□□□□□ -0.07
SF3B1-204ENST00000414963 PLK1P53350 603 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 GAD2Q05329 585 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 SERINC3Q13530 473 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 SLC12A1Q13621 1099 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 DARS2Q6PI48 645 aaKnown RBP14.6□□□□□ -0.07
SF3B1-204ENST00000414963 SYDE1Q6ZW31 735 aaPredicted RBP14.6□□□□□ -0.07
SF3B1-204ENST00000414963 ZC3H18Q86VM9 953 aaKnown RBP14.6□□□□□ -0.07
SF3B1-204ENST00000414963 YAF2Q8IY57 180 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 CCDC105Q8IYK2 499 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 CARNMT1Q8N4J0 409 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 ALLCQ8N6M5 410 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 OR52K2Q8NGK3 314 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 GRK7Q8WTQ7 553 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 RTP4Q96DX8 246 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 ALG14Q96F25 216 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 HMCESQ96FZ2 354 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 CELF6Q96J87 481 aaKnown RBP14.6□□□□□ -0.07
SF3B1-204ENST00000414963 LGMNQ99538 433 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 KXD1Q9BQD3 176 aa14.6□□□□□ -0.07
SF3B1-204ENST00000414963 TRMT61BQ9BVS5 477 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms