RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CLCN5P51795 746 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 SKP1P63208 163 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 RASGEF1CQ8N431 466 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 HIPK4Q8NE63 616 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 CENPTQ96BT3 561 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 XPNPEP1Q9NQW7 623 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 THAP1Q9NVV9 213 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 B2RBV5 119 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TMEM114B3SHH9 223 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 MDM4O15151 490 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TREHO43280 583 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 HLA-DPA1P20036 260 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 ZC3H12AQ5D1E8 599 aaKnown RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TFAP2DQ7Z6R9 452 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 VPS51Q9UID3 782 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 MAPK9P45984 424 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 ARHGAP1Q07960 439 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 PARP15Q460N3 678 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 PPP1R26Q5T8A7 1209 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 FAM46CQ5VWP2 391 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 PRMT9Q6P2P2 845 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TAGAPQ8N103 731 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 SLC39A8Q9C0K1 460 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 SORCS3Q9UPU3 1222 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TJP1Q07157 1748 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 EPHB6O15197 1021 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 FGF1P05230 155 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 ADRA1DP25100 572 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 POLD2P49005 469 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 HPCAP84074 193 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 CNTN1Q12860 1018 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 PRPF39Q86UA1 669 aaKnown RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 PIK3R5Q8WYR1 880 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TUBGCP3Q96CW5 907 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 RGS18Q9NS28 235 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 KLC4Q9NSK0 619 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 TAS2R14Q9NYV8 317 aa12.2□□□□□ -0.46
PTPRF-205ENST00000414879 MRPS23Q9Y3D9 190 aaKnown RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 HBS1LQ9Y450 684 aaKnown RBP12.2□□□□□ -0.46
PTPRF-205ENST00000414879 IFNA14P01570 189 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 CCNB1P14635 433 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 PCSK2P16519 638 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 DGKAP23743 735 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 MGAT1P26572 445 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 POU6F1Q14863 301 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 ANKS6Q68DC2 871 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 ATL1Q8WXF7 558 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 CASP10Q92851 521 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 POP5Q969H6 163 aaKnown RBP12.19□□□□□ -0.46
PTPRF-205ENST00000414879 NAF1Q96HR8 494 aaKnown RBP12.19□□□□□ -0.46
PTPRF-205ENST00000414879 CCDC134Q9H6E4 229 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 SRRDQ9UH36 339 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 FAF1Q9UNN5 650 aaPredicted RBP12.19□□□□□ -0.46
PTPRF-205ENST00000414879 H3BQF6 201 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 BMP10O95393 424 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 FGFR1P11362 822 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 ENO3P13929 434 aaPredicted RBP12.19□□□□□ -0.46
PTPRF-205ENST00000414879 CALB2P22676 271 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 MZF1P28698 734 aaPredicted RBP12.19□□□□□ -0.46
PTPRF-205ENST00000414879 RFC2P35250 354 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 TTPAP49638 278 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 DAB2IPQ5VWQ8 1189 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 AFTPHQ6ULP2 937 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 C1orf127Q8N9H9 656 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 SQORQ9Y6N5 450 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 FAM45BPQ6NSW5 357 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 OR56A4Q8NGH8 313 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 RDH11Q8TC12 318 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 FAM45AQ8TCE6 357 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 ART4Q93070 314 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 MCCC1Q96RQ3 725 aaPredicted RBP12.19□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF556Q9HAH1 456 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 EVA1BQ9NVM1 165 aa12.19□□□□□ -0.46
PTPRF-205ENST00000414879 DYRK3O43781 588 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 TLR5O60602 858 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 NUDT17P0C025 328 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ALOX15P16050 662 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 CCL23P55773 120 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 C15orf59Q2T9L4 293 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 OTOAQ7RTW8 1153 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 LRRC34Q8IZ02 419 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF555Q8NEP9 628 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 SEMA4DQ92854 862 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 MLPHQ9BV36 600 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 SMPD4Q9NXE4 827 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 MARCOQ9UEW3 520 aaPredicted RBP12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ASB3Q9Y575 518 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF831Q5JPB2 1677 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms