RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SERPINF2P08697 491 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8HP0CJ92 632 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CCDC166P0CW27 439 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 FGFR1P11362 822 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CYP19A1P11511 503 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KRT3P12035 628 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CCDC130P13994 396 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KRT4P19013 534 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CPN2P22792 545 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 U2AF2P26368 475 aaKnown RBP eCLIP3.75□□□□□ -1.811e-8■■■■□ 23.6
SF3B1-203ENST00000414174 GUCY1A2P33402 732 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 NUP62P37198 522 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TAGLN2P37802 199 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GP5P40197 560 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MLH1P40692 756 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PPP1R2P41236 205 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 DPP6P42658 865 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SERPINB8P50452 374 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF81P51508 661 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PRRX1P54821 245 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 EEF1A1P68104 462 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SRSF3P84103 164 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MC1RQ01726 317 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 EEF1A2Q05639 463 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ELP6Q0PNE2 266 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 EPS8Q12929 822 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 STK4Q13043 487 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KCNC3Q14003 757 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 E2F2Q14209 437 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 DMC1Q14565 340 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KRT31Q15323 416 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SEC23BQ15437 767 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ALX1Q15699 326 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 LEXMQ3ZCV2 418 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RTP2Q5QGT7 225 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 FAM26FQ5R3K3 315 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RNF220Q5VTB9 566 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 EEF1A1P5Q5VTE0 462 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TDRD10Q5VZ19 366 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 FBXW10Q5XX13 1052 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GTF2IRD2BQ6EKJ0 949 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ACAD10Q6JQN1 1059 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PPP1R2P3Q6NXS1 205 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 METTL2BQ6P1Q9 378 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 NOTUMQ6P988 496 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ZCCHC12Q6PEW1 402 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 DEGS2Q6QHC5 323 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SYT10Q6XYQ8 523 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MACC1Q6ZN28 852 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RUFY4Q6ZNE9 571 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 DENND5BQ6ZUT9 1274 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 UBE3BQ7Z3V4 1068 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KRT28Q7Z3Y7 464 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ADGRG6Q86SQ4 1221 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GTF2IRD2Q86UP8 949 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CHD1LQ86WJ1 897 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 METTL23Q86XA0 190 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 DNAAF5Q86Y56 855 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RHPN2Q8IUC4 686 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ZFPM1Q8IX07 1006 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SIRT2Q8IXJ6 389 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 KIAA2013Q8IYS2 634 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 RTL3Q8N8U3 475 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MAB21L3Q8N8X9 362 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SYT8Q8NBV8 401 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TMEM52Q8NDY8 209 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF680Q8NEM1 530 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SLC24A4Q8NFF2 622 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PPP1R35Q8TAP8 253 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 POC1BQ8TC44 478 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 IRGQQ8WZA9 623 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 STAMQ92783 540 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PHKBQ93100 1093 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PPP1R14AQ96A00 147 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 FAM162AQ96A26 154 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CYFIP2Q96F07 1278 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MED30Q96HR3 178 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PGBD1Q96JS3 809 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PRAM1Q96QH2 718 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TUBGCP5Q96RT8 1024 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 WRNIP1Q96S55 665 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 GORASP1Q9BQQ3 440 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 MLPHQ9BV36 600 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CARD6Q9BX69 1037 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 IFIH1Q9BYX4 1025 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF518BQ9C0D4 1074 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 BTBD1Q9H0C5 482 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 HIPK3Q9H422 1215 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PRDM13Q9H4Q3 707 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 VTA1Q9NP79 307 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 PNPLA8Q9NP80 782 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SNX15Q9NRS6 342 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ASNSD1Q9NWL6 643 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TMEM160Q9NX00 188 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 ERVK13-1Q9NX77 482 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 C5AR2Q9P296 337 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 LARSQ9P2J5 1176 aaKnown RBP3.75□□□□□ -1.81
SF3B1-203ENST00000414174 TRPS1Q9UHF7 1281 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 SNX6Q9UNH7 406 aa3.75□□□□□ -1.81
SF3B1-203ENST00000414174 CHMP2BQ9UQN3 213 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms