RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 BRI3BPQ8WY22 251 aa9.12□□□□□ -0.95
SIK3-202ENST00000413553 TMA16Q96EY4 203 aaKnown RBP9.12□□□□□ -0.95
SIK3-202ENST00000413553 FERMT1Q9BQL6 677 aa9.12□□□□□ -0.95
SIK3-202ENST00000413553 NUF2Q9BZD4 464 aa9.12□□□□□ -0.95
SIK3-202ENST00000413553 PORCNQ9H237 461 aa9.12□□□□□ -0.95
SIK3-202ENST00000413553 NR2E3Q9Y5X4 410 aa9.12□□□□□ -0.95
SIK3-202ENST00000413553 WDR90Q96KV7 1748 aa9.12□□□□□ -0.95
SIK3-202ENST00000413553 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 CNMDO75829 334 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ATG7O95352 703 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 TGM2P21980 687 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 TCF7P36402 384 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 ZNF143P52747 638 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 AP3M2P53677 418 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ART3Q13508 389 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 CST9Q5W186 159 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 POTEHQ6S545 545 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 TICAM1Q8IUC6 712 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 CDKL3Q8IVW4 592 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 ALDH16A1Q8IZ83 802 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 SMYD1Q8NB12 490 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 UBA3Q8TBC4 463 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ZSCAN18Q8TBC5 510 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 RTP4Q96DX8 246 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 MARK4Q96L34 752 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ZNF512Q96ME7 567 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 CNPY3Q9BT09 278 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 GCOM2Q9BZD3 368 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 MAF1Q9H063 256 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 LHX5Q9H2C1 402 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 MOCS1Q9NZB8 636 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 EPS15L1Q9UBC2 864 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ADGRA2Q96PE1 1338 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 RGSL1A5PLK6 1076 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 SPATA31C2B4DYI2 1134 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ENDOD1O94919 500 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 CSPG5O95196 566 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PIGRP01833 764 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 KCNA2P16389 499 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ZNF23P17027 643 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PTPN1P18031 435 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 ME2P23368 584 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 EPHA3P29320 983 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 ENTPD1P49961 510 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PLOD1Q02809 727 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 CEACAM7Q14002 265 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 STILQ15468 1287 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PIGGQ5H8A4 983 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 TMEM126BQ8IUX1 230 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PQLC3Q8N755 202 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PCDH19Q8TAB3 1148 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 GTF3C2Q8WUA4 911 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 SREK1Q8WXA9 508 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 MOCOSQ96EN8 888 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PIWIL1Q96J94 861 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 KLHL32Q96NJ5 620 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 DCUN1D5Q9BTE7 237 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 WDR41Q9HAD4 459 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 MICAL2O94851 1124 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 TNNC2P02585 160 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PRKCGP05129 697 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 F7P08709 466 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 MGAT1P26572 445 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 MAGEA3P43357 314 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 CDK9P50750 372 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 SLC10A2Q12908 348 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 CA9Q16790 459 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 USP41Q3LFD5 358 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 HEATR6Q6AI08 1181 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 CES3Q6UWW8 571 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 NAPRTQ6XQN6 538 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 CYP4V2Q6ZWL3 525 aaPredicted RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 DPP9Q86TI2 863 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 LRRC43Q8N309 656 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 DLG3Q92796 817 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PARK7Q99497 189 aaKnown RBP9.11□□□□□ -0.95
SIK3-202ENST00000413553 TMEM79Q9BSE2 394 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 TRPV6Q9H1D0 765 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 FAIMQ9NVQ4 179 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 HMGXB4Q9UGU5 601 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 PADI4Q9UM07 663 aa9.11□□□□□ -0.95
SIK3-202ENST00000413553 SIP14410 1827 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 MGAMO43451 1857 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 SOCS7O14512 581 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 RNASEH2AO75792 299 aaKnown RBP9.1□□□□□ -0.95
SIK3-202ENST00000413553 ERVK-10P10266 1014 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 TPSB2P20231 275 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 MPSTP25325 297 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 MAGEA6P43360 314 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 SP2Q02086 613 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 PTPN11Q06124 597 aaPredicted RBP9.1□□□□□ -0.95
SIK3-202ENST00000413553 NIPAL4Q0D2K0 466 aa9.1□□□□□ -0.95
SIK3-202ENST00000413553 TPSAB1Q15661 275 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms