RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 MYL7Q01449 175 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 RNASELQ05823 741 aaKnown RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 GABPAQ06546 454 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 BNIP1Q12981 228 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ITPK1Q13572 414 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 GRAPQ13588 217 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 GIT2Q14161 759 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 RASA2Q15283 850 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 LRRC41Q15345 812 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 PCBP1Q15365 356 aaKnown RBP eCLIP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 CNGA2Q16280 664 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 PARP6Q2NL67 630 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 TKFCQ3LXA3 575 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 DCAF17Q5H9S7 520 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ZBTB41Q5SVQ8 909 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 NAIF1Q69YI7 327 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ZDHHC24Q6UX98 284 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 RGS9BPQ6ZS82 235 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 INTS8Q75QN2 995 aaKnown RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 KCNK18Q7Z418 384 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 APBB1IPQ7Z5R6 666 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 FAM228AQ86W67 206 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 SFR1Q86XK3 245 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 NELFCDQ8IXH7 590 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 C12orf56Q8IXR9 622 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 FAM186BQ8IYM0 893 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 OR5M3Q8NGP4 307 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 OR2W6PQ8NHA6 318 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 SLC35G2Q8TBE7 412 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ETNPPLQ8TBG4 499 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 GRAPLQ8TC17 118 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 U2AF1L4Q8WU68 220 aaKnown RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 DYDC1Q8WWB3 177 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 CRYGNQ8WXF5 182 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ART4Q93070 314 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ZG16BQ96DA0 208 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 DYNLL2Q96FJ2 89 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 GPR101Q96P66 508 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 TMEM237Q96Q45 408 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 SELENOSQ9BQE4 189 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 CCDC77Q9BR77 488 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 CPPED1Q9BRF8 314 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 REEP2Q9BRK0 252 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 TIPINQ9BVW5 301 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ANO3Q9BYT9 981 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ENKD1Q9H0I2 346 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 NEUROG2Q9H2A3 272 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 RABEP2Q9H5N1 569 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 LRRC19Q9H756 370 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 JMJD4Q9H9V9 463 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 TUFT1Q9NNX1 390 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 ARHGEF3Q9NR81 526 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 NKIRAS1Q9NYS0 192 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 GRHL1Q9NZI5 618 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 USP36Q9P275 1121 aaKnown RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 BCCIPQ9P287 314 aaKnown RBP eCLIP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 CNOT8Q9UFF9 292 aaKnown RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 PNMA2Q9UL42 364 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 CORO1CQ9ULV4 474 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 SORCS3Q9UPU3 1222 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 RABGAP1Q9Y3P9 1069 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 PCDHA3Q9Y5H8 950 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 LY75O60449 1722 aa3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 COL2A1P02458 1487 aaPredicted RBP3.72□□□□□ -1.81
RNU6-55P-201ENST00000411092 SPATA31A5Q5VU36 1347 aa3.71□□□□□ -1.81
RNU6-55P-201ENST00000411092 SPATA31A6Q5VVP1 1343 aa3.71□□□□□ -1.81
RNU6-55P-201ENST00000411092 SPATA31A7Q8IWB4 1347 aa3.71□□□□□ -1.81
RNU6-55P-201ENST00000411092 ARHGEF17Q96PE2 2063 aaPredicted RBP3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 LCHNA4D1U4 455 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 E9PMD0 336 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 MAGEB2O15479 319 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 EDIL3O43854 480 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 MED24O75448 989 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 DCTN3O75935 186 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 UNC5CO95185 931 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 GCNT3O95395 438 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 TTC4O95801 387 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 CYP1A2P05177 515 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 HLA-DOAP06340 250 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 PFKMP08237 780 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 VIMP08670 466 aaKnown RBP3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 MYBL1P10243 752 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 ACTN1P12814 892 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 KRT13P13646 458 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 SCP2P22307 547 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 KLRK1P26718 216 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 TM4SF1P30408 202 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 ABCD1P33897 745 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 SLC1A1P43005 524 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 MSH2P43246 934 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 DNA2P51530 1060 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 PLTPP55058 493 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 SH3BGRP55822 239 aaPredicted RBP3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 RWDD2BP57060 319 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 RHBDL3P58872 404 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 RNASE9P60153 205 aaKnown RBP3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 NCALDP61601 193 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 GPC5P78333 572 aa3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 MRPS35P82673 323 aaKnown RBP3.71□□□□□ -1.82
RNU6-55P-201ENST00000411092 IL9RQ01113 521 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms