RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 FPGT-TNNI3KV9GXZ4 949 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 NCOR2Q9Y618 2525 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MYH7P12883 1935 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 KMT2EQ8IZD2 1858 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 A0A1W2PR48 441 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 DDX3XO00571 662 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLK1-202ENST00000409403 TRAFD1O14545 582 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 MAPK13O15264 365 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 RNF113AO15541 343 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 PAX4O43316 350 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 RANBP6O60518 1105 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 HNRNPLP14866 589 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLK1-202ENST00000409403 PAX3P23760 479 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 EDNRBP24530 442 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MARK3P27448 753 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 SESN2P58004 480 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 HPCAP84074 193 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PPP3CAQ08209 521 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MGAT2Q10469 447 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 AP1B1Q10567 949 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 GRM3Q14832 879 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 RPS6KA1Q15418 735 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 SHHQ15465 462 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CLPPQ16740 277 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 CFAP157Q5JU67 520 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 GJC2Q5T442 439 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 MFSD5Q6N075 450 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 OLFML1Q6UWY5 402 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PPP1R21Q6ZMI0 780 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MARK2Q7KZI7 788 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 VSIG1Q86XK7 387 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MAP7D3Q8IWC1 876 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 DIS3L2Q8IYB7 885 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 UNC5BQ8IZJ1 945 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 LSM14AQ8ND56 463 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 PRSS33Q8NF86 280 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 GPR156Q8NFN8 814 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 NUDT10Q8NFP7 164 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CTNNBL1Q8WYA6 563 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 SYN2Q92777 582 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 STMN2Q93045 179 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 SLC35B4Q969S0 331 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 HDAC10Q969S8 669 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MVB12AQ96EY5 273 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 NUDT11Q96G61 164 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PUS3Q9BZE2 481 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 ZMYND12Q9H0C1 365 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 KCNH6Q9H252 994 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PABPC3Q9H361 631 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 MLXIPQ9HAP2 919 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 GPR108Q9NPR9 543 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PAG1Q9NWQ8 432 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 DDX43Q9NXZ2 648 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 MTRF1LQ9UGC7 380 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 PNMA2Q9UL42 364 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CNOT6Q9ULM6 557 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 ACACBO00763 2458 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 FRMPD3Q5JV73 1810 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ECM29Q5VYK3 1845 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ZNF292O60281 2723 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ZFHX2Q9C0A1 2572 aaPredicted RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 MYH7BA7E2Y1 1941 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 MYH13Q9UKX3 1938 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 A8MUI8 341 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 FAM171A2A8MVW0 826 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DAPK3O43293 454 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 CBFA2T3O75081 653 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 TMEM127O75204 238 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ZWINTO95229 277 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DEXIO95424 95 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 RPN1P04843 607 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 EIF2S1P05198 315 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 PABPC4LP0CB38 370 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 GAAP10253 952 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 CTSSP25774 331 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ANXA13P27216 316 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ECHS1P30084 290 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 CXCR5P32302 372 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 MTIF2P46199 727 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 POLGP54098 1239 aaPredicted RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 PMS2P54278 862 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 BPIFB4P59827 614 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 UBXN2AP68543 259 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 GPSM2P81274 684 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 SLC34A1Q06495 639 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DLX2Q07687 328 aaPredicted RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 ZBTB17Q13105 803 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DCTN2Q13561 401 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 NAB2Q15742 525 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 CNGA2Q16280 664 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 PGS1Q32NB8 556 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 C3orf36Q3SXR2 165 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 VWA3BQ502W6 1294 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 PDCD4Q53EL6 469 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 EPHA10Q5JZY3 1008 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 AKNAD1Q5T1N1 836 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ATG14Q6ZNE5 492 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms