RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CWF19L1Q69YN2 538 aaKnown RBP30.15■■■□□ 2.42
USP42-202ENST00000404008 NUDT18Q6ZVK8 323 aa30.15■■■□□ 2.42
USP42-202ENST00000404008 KATNAL2Q8IYT4 538 aa30.15■■■□□ 2.42
USP42-202ENST00000404008 AHI1Q8N157 1196 aa30.15■■■□□ 2.42
USP42-202ENST00000404008 WFIKKN2Q8TEU8 576 aa30.15■■■□□ 2.42
USP42-202ENST00000404008 ALS2CR12Q96Q35 445 aa30.15■■■□□ 2.42
USP42-202ENST00000404008 ZNF670Q9BS34 389 aa30.15■■■□□ 2.42
USP42-202ENST00000404008 LRRD1A4D1F6 860 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 C3orf70A6NLC5 250 aaPredicted RBP30.14■■■□□ 2.41
USP42-202ENST00000404008 USP27XA6NNY8 438 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 RHOCP08134 193 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 CSKP41240 450 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 MMRN1Q13201 1228 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 FZD5Q13467 585 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 FUT11Q495W5 492 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 TMEM215Q68D42 235 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 ADIPOR2Q86V24 386 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 CCDC105Q8IYK2 499 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 DNAI1Q9UI46 699 aa30.14■■■□□ 2.41
USP42-202ENST00000404008 CCDC66A2RUB6 948 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 ERCC2P18074 760 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 MZF1P28698 734 aaPredicted RBP30.13■■■□□ 2.41
USP42-202ENST00000404008 DGKKQ5KSL6 1271 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 VSIG1Q86XK7 387 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 TRIM58Q8NG06 486 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 FAF2Q96CS3 445 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 FEM1AQ9BSK4 669 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 INTS6Q9UL03 887 aaKnown RBP30.13■■■□□ 2.41
USP42-202ENST00000404008 OR51B4Q9Y5P0 310 aa30.13■■■□□ 2.41
USP42-202ENST00000404008 ILVBLA1L0T0 632 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 PEX5P50542 639 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 PLK1P53350 603 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 LRRC32Q14392 662 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 DMC1Q14565 340 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 ODF2Q5BJF6 829 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 ANKRD20A8PQ5CZ79 823 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 PITRM1Q5JRX3 1037 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 RNF219Q5W0B1 726 aaPredicted RBP30.12■■■□□ 2.41
USP42-202ENST00000404008 ZNF783Q6ZMS7 281 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 ALG14Q96F25 216 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 RBM12Q9NTZ6 932 aaKnown RBP30.12■■■□□ 2.41
USP42-202ENST00000404008 DONSONQ9NYP3 566 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 PACSIN2Q9UNF0 486 aaPredicted RBP30.12■■■□□ 2.41
USP42-202ENST00000404008 STARD13Q9Y3M8 1113 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 SIT1Q9Y3P8 196 aa30.12■■■□□ 2.41
USP42-202ENST00000404008 MUC22E2RYF6 1773 aaPredicted RBP30.11■■■□□ 2.41
USP42-202ENST00000404008 MIF4GDA9UHW6 222 aaKnown RBP30.11■■■□□ 2.41
USP42-202ENST00000404008 ZNF487B1APH4 448 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 AMPD1P23109 780 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 EIF4HQ15056 248 aaKnown RBP30.11■■■□□ 2.41
USP42-202ENST00000404008 PLEKHG6Q3KR16 790 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 FBXO43Q4G163 708 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 APCDD1Q8J025 514 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 HES6Q96HZ4 224 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 MUC3BQ9H195 1237 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 LMAN1LQ9HAT1 526 aa30.11■■■□□ 2.41
USP42-202ENST00000404008 A0A0D9SEW6 157 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 GOLGA6L9A6NEM1 432 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 DCLK1O15075 740 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 CHRM1P11229 460 aaPredicted RBP30.1■■■□□ 2.41
USP42-202ENST00000404008 GNA12Q03113 381 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 MBLAC2Q68D91 279 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 BMP8AQ7Z5Y6 402 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 UMODL1-AS1Q8N2C9 162 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 SYNPOQ8N3V7 929 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 EXD1Q8NHP7 514 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 PCDH19Q8TAB3 1148 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 UBE2Q2Q8WVN8 375 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 CLDN23Q96B33 292 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 RNF25Q96BH1 459 aaPredicted RBP30.1■■■□□ 2.41
USP42-202ENST00000404008 NOL6Q9H6R4 1146 aaKnown RBP30.1■■■□□ 2.41
USP42-202ENST00000404008 ETNK2Q9NVF9 386 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 ELOVL2Q9NXB9 296 aa30.1■■■□□ 2.41
USP42-202ENST00000404008 ANTXRLA6NF34 631 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 NCAM2O15394 837 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 TIMM44O43615 452 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 RAMP2O60895 175 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 ZRANB2O95218 330 aaKnown RBP eCLIP30.09■■■□□ 2.41
USP42-202ENST00000404008 KIR2DL1P43626 348 aaPredicted RBP30.09■■■□□ 2.41
USP42-202ENST00000404008 SEC13P55735 322 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 MFSD7Q6UXD7 560 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 RCOR2Q8IZ40 523 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 UBL4BQ8N7F7 174 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 ALG3Q92685 438 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 TTC17Q96AE7 1141 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 PBXIP1Q96AQ6 731 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 CIPCQ9C0C6 399 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 KLC2Q9H0B6 622 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 KCND1Q9NSA2 647 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 HCN2Q9UL51 889 aa30.09■■■□□ 2.41
USP42-202ENST00000404008 NYNRINQ9P2P1 1898 aaKnown RBP30.08■■■□□ 2.41
USP42-202ENST00000404008 DDX3YO15523 660 aaKnown RBP30.08■■■□□ 2.41
USP42-202ENST00000404008 RNF40O75150 1001 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 POLR2EP19388 210 aaKnown RBP30.08■■■□□ 2.41
USP42-202ENST00000404008 AOC1P19801 751 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 CLCN5P51795 746 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 RWDD2BP57060 319 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 TAZQ16635 292 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 MEI1Q5TIA1 1274 aa30.08■■■□□ 2.41
USP42-202ENST00000404008 NPWQ8N729 165 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms