RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PQLC3Q8N755 202 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 RTL3Q8N8U3 475 aaKnown RBP16.38■□□□□ 0.21
HMGA1-204ENST00000401473 EXD1Q8NHP7 514 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 FAM3CQ92520 227 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 ALG14Q96F25 216 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 RNF157Q96PX1 679 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 WDR24Q96S15 920 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 P2RY13Q9BPV8 354 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 HERPUD2Q9BSE4 406 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 CATSPERBQ9H7T0 1116 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 RCOR3Q9P2K3 495 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-204ENST00000401473 SLC27A6Q9Y2P4 619 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 MTF2Q9Y483 593 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-204ENST00000401473 VPS13AQ96RL7 3174 aa16.38■□□□□ 0.21
HMGA1-204ENST00000401473 A0A0A0MRY4 1105 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 ZNF135P52742 658 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-204ENST00000401473 STARD6P59095 220 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 AMPD2Q01433 879 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 ZNF211Q13398 564 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-204ENST00000401473 TMEM196Q5HYL7 178 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 SETD3Q86TU7 594 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-204ENST00000401473 APCDD1Q8J025 514 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 ZNF687Q8N1G0 1237 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 NPWQ8N729 165 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 PNKPQ96T60 521 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 JRKLQ9Y4A0 524 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 OR51B4Q9Y5P0 310 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 FGF10O15520 208 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-204ENST00000401473 KAT7O95251 611 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 GNG11P61952 73 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 PRKCQQ04759 706 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 KDSRQ06136 332 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 RPS6KA1Q15418 735 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 SPOCD1Q6ZMY3 1216 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 ADIPOR2Q86V24 386 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 UBL4BQ8N7F7 174 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 PSMB7Q99436 277 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 FEM1AQ9BSK4 669 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 RETREG1Q9H6L5 497 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 C11orf16Q9NQ32 467 aa16.37■□□□□ 0.21
HMGA1-204ENST00000401473 KIAA1522Q9P206 1035 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-204ENST00000401473 K7EQS6 105 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 CSKP41240 450 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 TFDP3Q5H9I0 405 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 RNF219Q5W0B1 726 aaPredicted RBP16.36■□□□□ 0.21
HMGA1-204ENST00000401473 FSTL4Q6MZW2 842 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 ZNF852Q6ZMS4 543 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 VSIG1Q86XK7 387 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 TERB1Q8NA31 727 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 HEMGNQ9BXL5 484 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 FOXQ1Q9C009 403 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 GGA2Q9UJY4 613 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
HMGA1-204ENST00000401473 hCG_1818297A0A087WSY0 165 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 TMEM221A6NGB7 291 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 ZNF487B1APH4 448 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 M0R296 226 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 EGFP01133 1207 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 ATP1A1P05023 1023 aaKnown RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 PABPC1P11940 636 aaKnown RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 CXCR5P32302 372 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 ACVRL1P37023 503 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 GRIA2P42262 883 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 MAPKAPK2P49137 400 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 SLC10A2Q12908 348 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 FZD5Q13467 585 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 FUT11Q495W5 492 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 ODF2Q5BJF6 829 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 C6orf118Q5T5N4 469 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 EMC10Q5UCC4 262 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 KAZNQ674X7 775 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 NCBP2-AS2Q69YL0 99 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 GRAMD4Q6IC98 578 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 CCDC50Q8IVM0 306 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 ARHGAP12Q8IWW6 846 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 PLD5Q8N7P1 536 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 OR7D4Q8NG98 312 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 CELF6Q96J87 481 aaKnown RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 LRRC19Q9H756 370 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 TBC1D17Q9HA65 648 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 NDRG2Q9UN36 371 aaKnown RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 DMDP11532 3685 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 MAN2B1O00754 1011 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 RHOCP08134 193 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 PLK1P53350 603 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 GNA12Q03113 381 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 CCINQ13939 588 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 PLEKHG6Q3KR16 790 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 AFMIDQ63HM1 303 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 SLC9A4Q6AI14 798 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 SORCS1Q8WY21 1168 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 MSANTD3Q96H12 275 aa16.35■□□□□ 0.21
HMGA1-204ENST00000401473 RBM41Q96IZ5 413 aaKnown RBP16.35■□□□□ 0.21
HMGA1-204ENST00000401473 SLC39A8Q9C0K1 460 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms