RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TP53INP2Q8IXH6 220 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RHOT1Q8IXI2 618 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 APCDD1Q8J025 514 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NPWQ8N729 165 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RTL3Q8N8U3 475 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ALG3Q92685 438 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FAF2Q96CS3 445 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SHDQ96IW2 340 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PSMB7Q99436 277 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PACSIN2Q9UNF0 486 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 A0A0D9SEW6 157 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FAM170BA6NMN3 283 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EEF2KO00418 725 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DDX3YO15523 660 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KRT1P04264 644 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 APODP05090 189 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DRD1P21728 446 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AMPD1P23109 780 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PLK1P53350 603 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF177Q13360 481 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TAZQ16635 292 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PLEKHG6Q3KR16 790 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PITRM1Q5JRX3 1037 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EMC10Q5UCC4 262 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MFSD7Q6UXD7 560 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 BMP8AQ7Z5Y6 402 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SETD3Q86TU7 594 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ARHGAP12Q8IWW6 846 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SUGP1Q8IWZ8 645 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KATNAL2Q8IYT4 538 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 C17orf53Q8N3J3 647 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NETO2Q8NC67 525 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FLCNQ8NFG4 579 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 OR7D4Q8NG98 312 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF670Q9BS34 389 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HERPUD2Q9BSE4 406 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 OSBPL6Q9BZF3 934 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZDHHC4Q9NPG8 344 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RCOR3Q9P2K3 495 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DNAI1Q9UI46 699 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PCDHA3Q9Y5H8 950 aa12.75□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MYO18AQ92614 2054 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KMT2EQ8IZD2 1858 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LRRD1A4D1F6 860 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TBC1D3BA6NDS4 549 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 H3BRJ5 948 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FGF10O15520 208 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DCNP07585 359 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RHOCP08134 193 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AOC1P19801 751 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 OR1E1P30953 314 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ACVRL1P37023 503 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CTSOP43234 321 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MAPKAPK2P49137 400 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF135P52742 658 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SEC13P55735 322 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GRSF1Q12849 480 aaKnown RBP eCLIP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KRT81Q14533 505 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PDK2Q15119 407 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DCAF12L1Q5VU92 463 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RNF219Q5W0B1 726 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AFMIDQ63HM1 303 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EGFLAMQ63HQ2 1017 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AHI1Q8N157 1196 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 UMODL1-AS1Q8N2C9 162 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 WFIKKN2Q8TEU8 576 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TTC17Q96AE7 1141 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MYO19Q96H55 970 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HES6Q96HZ4 224 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ACOX2Q99424 681 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RETREG1Q9H6L5 497 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LRRC19Q9H756 370 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LMAN1LQ9HAT1 526 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 C2orf42Q9NWW7 574 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MRPS17Q9Y2R5 130 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 STARD13Q9Y3M8 1113 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NUP205Q92621 2012 aa12.74□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZDBF2Q9HCK1 2354 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ILVBLA1L0T0 632 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SNAP91O60641 907 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RNF40O75150 1001 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZMPSTE24O75844 475 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GLDCP23378 1020 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ARL4AP40617 200 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CDKN2BP42772 138 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms