RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 VCPIP1Q96JH7 1222 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 TBCBQ99426 244 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 AGPAT1Q99943 283 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 SIK2Q9H0K1 926 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 RSPH9Q9H1X1 276 aaPredicted RBP14.36□□□□□ -0.11
SEC13-204ENST00000397099 SGK2Q9HBY8 427 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 PRSS16Q9NQE7 514 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 SLC25A13Q9UJS0 675 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 INTS6Q9UL03 887 aaKnown RBP14.36□□□□□ -0.11
SEC13-204ENST00000397099 VANGL2Q9ULK5 521 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 SLC6A14Q9UN76 642 aa14.36□□□□□ -0.11
SEC13-204ENST00000397099 CACNA1EQ15878 2313 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 DOCK4Q8N1I0 1966 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 IGLV3-10A0A075B6K4 115 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 A0A1B0GTH6 734 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 DRGXA6NNA5 263 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 TM4SF5O14894 197 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 ADCY5O95622 1261 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 SERPINC1P01008 464 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 KRT3P12035 628 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 HLA-EP13747 358 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 PDGFRAP16234 1089 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 ITPKAP23677 461 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 FLT3P36888 993 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 MAPK8P45983 427 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 KRT83P78385 493 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 NRG1Q02297 640 aaPredicted RBP14.35□□□□□ -0.11
SEC13-204ENST00000397099 GFPT1Q06210 699 aaPredicted RBP14.35□□□□□ -0.11
SEC13-204ENST00000397099 UAP1L1Q3KQV9 507 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 FIGNQ5HY92 759 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 N4BP2L1Q5TBK1 243 aaPredicted RBP14.35□□□□□ -0.11
SEC13-204ENST00000397099 CXorf57Q6NSI4 855 aaKnown RBP14.35□□□□□ -0.11
SEC13-204ENST00000397099 PSAPL1Q6NUJ1 521 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 DSG4Q86SJ6 1040 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 DNASE2BQ8WZ79 361 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 MYEOVQ96EZ4 313 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 MYO19Q96H55 970 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 MRGPRX3Q96LB0 322 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 FEM1AQ9BSK4 669 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 FUCA2Q9BTY2 467 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 C2orf49Q9BVC5 232 aaPredicted RBP14.35□□□□□ -0.11
SEC13-204ENST00000397099 SELENOOQ9BVL4 669 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 ZDHHC5Q9C0B5 715 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 BTBD1Q9H0C5 482 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 SLC6A17Q9H1V8 727 aa14.35□□□□□ -0.11
SEC13-204ENST00000397099 METTL5Q9NRN9 209 aaKnown RBP14.35□□□□□ -0.11
SEC13-204ENST00000397099 CXorf51AA0A1B0GTR3 108 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 MEI4A8MW99 385 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 GOLGA6L19H0YKK7 550 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 ALOX15BO15296 676 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 KCNK5O95279 499 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 ADH1BP00325 375 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 ETFBP38117 255 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 NOVA1P51513 510 aaKnown RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 ATXN3P54252 364 aaPredicted RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 RPS14P62263 151 aaKnown RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 ELAVL3Q14576 367 aaKnown RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 IQCB1Q15051 598 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 OTUD1Q5VV17 481 aaPredicted RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 RGL4Q8IZJ4 473 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 SLC30A5Q8TAD4 765 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 IGSF8Q969P0 613 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 CFAP57Q96MR6 1250 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 C11orf70Q9BRQ4 267 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 GPR174Q9BXC1 333 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 TMEM74BQ9NUR3 256 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 SEPT11Q9NVA2 429 aaKnown RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 PPARGC1AQ9UBK2 798 aaKnown RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 VPS28Q9UK41 221 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 FZD4Q9ULV1 537 aa14.34□□□□□ -0.11
SEC13-204ENST00000397099 CNOT1A5YKK6 2376 aaKnown RBP14.34□□□□□ -0.11
SEC13-204ENST00000397099 SYCE3A1L190 88 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 C2CD4BA6NLJ0 364 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 SIGLEC16A6NMB1 481 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 METTL12A8MUP2 240 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 RHOCP08134 193 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 CLCN6P51797 869 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 AIF1P55008 147 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 PTP4A2Q12974 167 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 C9orf64Q5T6V5 341 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 DNAJC24Q6P3W2 148 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 MON1BQ7L1V2 547 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 SLC41A1Q8IVJ1 513 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 APCDD1Q8J025 514 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 RXFP2Q8WXD0 754 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 CENPIQ92674 756 aaPredicted RBP14.33□□□□□ -0.12
SEC13-204ENST00000397099 CCDC114Q96M63 670 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 ZYG11BQ9C0D3 744 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 MUC3BQ9H195 1237 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 OSBPL2Q9H1P3 480 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 CAPN10Q9HC96 672 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 DONSONQ9NYP3 566 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
SEC13-204ENST00000397099 SPTBN2O15020 2390 aa14.33□□□□□ -0.12
SEC13-204ENST00000397099 NYNRINQ9P2P1 1898 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms