RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NEMP1O14524 444 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 STAG3L1P0CL83 205 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 CNTFP26441 200 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 MLH1P40692 756 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 HARS2P49590 506 aaKnown RBP24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 MS4A2Q01362 244 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 ZNF423Q2M1K9 1284 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 PPP1R26Q5T8A7 1209 aaPredicted RBP24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 ACOT1Q86TX2 421 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 DSELQ8IZU8 1212 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 ADAM32Q8TC27 787 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 ACMSDQ8TDX5 336 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 TMPRSS4Q9NRS4 437 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 DCDC2Q9UHG0 476 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 B4GALT4O60513 344 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 PRKCGP05129 697 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 ZNF23P17027 643 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 PKNOX1P55347 436 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 EML3Q32P44 896 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 EPGNQ6UW88 154 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 Q6ZNX1 250 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 COPS5Q92905 334 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 ZNF512Q96ME7 567 aaPredicted RBP24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 CXCL16Q9H2A7 254 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 COPG2Q9UBF2 871 aa24.53■■□□□ 1.52
CSNK1E-203ENST00000396832 SH3PXD2BA1X283 911 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 NOP56O00567 594 aaKnown RBP24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 CFLARO15519 480 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 DGKIO75912 1065 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 DPEP1P16444 411 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 PPM1LQ5SGD2 360 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 FAM160B1Q5W0V3 765 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 C16orf89Q6UX73 402 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 BNC2Q6ZN30 1099 aaPredicted RBP24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 KYQ8NBH2 561 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 MOCS1Q9NZB8 636 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 GJA3Q9Y6H8 435 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 CCDC78A2IDD5 438 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 XPO1O14980 1071 aaKnown RBP24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 PFKMP08237 780 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 CPA3P15088 417 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 TNFAIP1Q13829 316 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 SNX32Q86XE0 403 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 C7orf31Q8N865 590 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 MTMR14Q8NCE2 650 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 MCUQ8NE86 351 aa24.52■■□□□ 1.52
CSNK1E-203ENST00000396832 IGKV6D-21A0A0A0MT36 114 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 ZBTB42B2RXF5 422 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 USP12O75317 370 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 MAGEA3P43357 314 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 MAGEA6P43360 314 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 GRM1Q13255 1194 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 HEATR6Q6AI08 1181 aaKnown RBP24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 PACS1Q6VY07 963 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 PATL1Q86TB9 770 aaKnown RBP24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 ZNF781Q8N8C0 355 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 USP13Q92995 863 aaPredicted RBP24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 RTP4Q96DX8 246 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 PLGRKTQ9HBL7 147 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 RNF11Q9Y3C5 154 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 ZBTB7AO95365 584 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 ENTPD1P49961 510 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 MPP3Q13368 585 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 NRF1Q16656 503 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 PIGGQ5H8A4 983 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 IER5Q5VY09 327 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 DLK2Q6UY11 383 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 GRIN3AQ8TCU5 1115 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 MAPK15Q8TD08 544 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 OR52B2Q96RD2 323 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 CEP350Q5VT06 3117 aa24.51■■□□□ 1.51
CSNK1E-203ENST00000396832 PGK2P07205 417 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 TGM2P21980 687 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 CCR10P46092 362 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 C16orf72Q14CZ0 275 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 STILQ15468 1287 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 SURF1Q15526 300 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 BIRC8Q96P09 236 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 CAB39LQ9H9S4 337 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 BCAP29Q9UHQ4 241 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 PRSS51A0A1B0GVH4 220 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 BCLAF3A2AJT9 711 aaKnown RBP24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 NELFEP18615 380 aaKnown RBP24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 PIK3R1P27986 724 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 TYK2P29597 1187 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 DLG2Q15700 870 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 CCDC185Q8N715 623 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 SEPT1Q8WYJ6 367 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 AGAP3Q96P47 875 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 CDH19Q9H159 772 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 PTPRHQ9HD43 1115 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 CDY2AQ9Y6F7 541 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 CDY1Q9Y6F8 540 aa24.5■■□□□ 1.51
CSNK1E-203ENST00000396832 GOT1P17174 413 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 CEACAM7Q14002 265 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 PPP2R5DQ14738 602 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 SLC9A4Q6AI14 798 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 EFCAB12Q6NXP0 572 aa24.49■■□□□ 1.51
CSNK1E-203ENST00000396832 TTC30AQ86WT1 665 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms