RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PDZD4Q76G19 769 aaPredicted RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 ZNF398Q8TD17 642 aa14.29□□□□□ -0.12
SNCA-204ENST00000394989 ZNF419Q96HQ0 510 aaPredicted RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 CELF6Q96J87 481 aaKnown RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 CPSF2Q9P2I0 782 aaKnown RBP14.29□□□□□ -0.12
SNCA-204ENST00000394989 GSRP00390 522 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 TAF11Q15544 211 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 DCLRE1AQ6PJP8 1040 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 MTDHQ86UE4 582 aaKnown RBP14.28□□□□□ -0.12
SNCA-204ENST00000394989 STKLD1Q8NE28 680 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 LINC01599Q8WXQ3 324 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 UROC1Q96N76 676 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 GBA3Q9H227 469 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 SIRPGQ9P1W8 387 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 A0A0G2JND7 137 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 IL1BP01584 269 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 TROVE2P10155 538 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNCA-204ENST00000394989 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 CKBP12277 381 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 TEX44Q53QW1 395 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 TAF1BQ53T94 588 aaPredicted RBP14.28□□□□□ -0.12
SNCA-204ENST00000394989 ARHGAP36Q6ZRI8 547 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 CCNJLQ8IV13 435 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 UTP4Q969X6 686 aaKnown RBP14.28□□□□□ -0.12
SNCA-204ENST00000394989 ZNF395Q9H8N7 513 aaPredicted RBP14.28□□□□□ -0.12
SNCA-204ENST00000394989 ARHGEF38Q9NXL2 777 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 HAO1Q9UJM8 370 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 RPS6KL1Q9Y6S9 549 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 MSI1O43347 362 aaKnown RBP14.28□□□□□ -0.12
SNCA-204ENST00000394989 TGDSO95455 350 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 SRGAP2BP0DMP2 458 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 NFKB1P19838 968 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 ACLYP53396 1101 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 PCSK9Q8NBP7 692 aaKnown RBP14.28□□□□□ -0.12
SNCA-204ENST00000394989 TRIM55Q9BYV6 548 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 C20orf27Q9GZN8 174 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 RGS18Q9NS28 235 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 SFMBT1Q9UHJ3 866 aa14.28□□□□□ -0.12
SNCA-204ENST00000394989 C2orf71A6NGG8 1288 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 IRAK2O43187 625 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 CBX6O95503 412 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 POLBP06746 335 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 F7P08709 466 aaPredicted RBP14.27□□□□□ -0.12
SNCA-204ENST00000394989 CNTFP26441 200 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 SESN3P58005 492 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 YWHAHQ04917 246 aaPredicted RBP14.27□□□□□ -0.12
SNCA-204ENST00000394989 BEND5Q7L4P6 421 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 CLNKQ7Z7G1 428 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 CNTD1Q8N815 330 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 RNF34Q969K3 372 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 NAT9Q9BTE0 207 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 OSBPL2Q9H1P3 480 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 NMUR1Q9HB89 426 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 CASS4Q9NQ75 786 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 EMCNQ9ULC0 261 aa14.27□□□□□ -0.12
SNCA-204ENST00000394989 MRPL42Q9Y6G3 142 aaKnown RBP14.27□□□□□ -0.12
SNCA-204ENST00000394989 TPP1O14773 563 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 TYMPP19971 482 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 BST1Q10588 318 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.13
SNCA-204ENST00000394989 TMEM135Q86UB9 458 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 CASP10Q92851 521 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 SLC7A6OSQ96CW6 309 aaPredicted RBP14.27□□□□□ -0.13
SNCA-204ENST00000394989 CERS2Q96G23 380 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 BRD8Q9H0E9 1235 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 SIK2Q9H0K1 926 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 EBF2Q9HAK2 575 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 NUDT5Q9UKK9 219 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 MYO16Q9Y6X6 1858 aa14.27□□□□□ -0.13
SNCA-204ENST00000394989 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SKIP12755 728 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 MX2P20592 715 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SERPINB6P35237 376 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 ERFP50548 548 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 ZNF135P52742 658 aaPredicted RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 TSPY1Q01534 308 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 DSC1Q08554 894 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 MAPRE1Q15691 268 aaKnown RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 HSF5Q4G112 596 aaPredicted RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 CERCAMQ5T4B2 595 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 MAP3K21Q5TCX8 1036 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 CDKL2Q92772 493 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 PRR11Q96HE9 360 aaPredicted RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 TEKT5Q96M29 485 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 APOL2Q9BQE5 337 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 TXLNGQ9NUQ3 528 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 NDFIP2Q9NV92 336 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 OSER1Q9NX31 292 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 UBP1Q9NZI7 540 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 CCDC195A0A1B0GUA6 201 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 ITGA2BP08514 1039 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms