RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CORO1AP31146 461 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 PAPOLAP51003 745 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 SEMA5AQ13591 1074 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 LONRF1Q17RB8 773 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ALFQ53S48 1182 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 DNAJC21Q5F1R6 531 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 C6orf118Q5T5N4 469 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 RFWD3Q6PCD5 774 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 LILRA6Q6PI73 481 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 SPRED2Q7Z698 418 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 CROCCP2Q86T23 111 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 CIR1Q86X95 450 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 ARHGAP12Q8IWW6 846 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ZNF683Q8IZ20 524 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 HS6ST3Q8IZP7 471 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.85□□□□□ -0.99
TDP1-203ENST00000393454 MRPL43Q8N983 215 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 PLD4Q96BZ4 506 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 SERPINB12Q96P63 405 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 CYP2S1Q96SQ9 504 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 PRMT1Q99873 361 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 FRMD8Q9BZ67 464 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 TMEM248Q9NWD8 314 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 RSPH14Q9UHP6 348 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 CHMP2BQ9UQN3 213 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TTLL3Q9Y4R7 772 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ANAPC1Q9H1A4 1944 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 DRGXA6NNA5 263 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 WASH4PA8MWX3 477 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 E7ESA3 106 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TRDMT1O14717 391 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 CCL16O15467 120 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 OAS1P00973 400 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 F11P03951 625 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 MYL4P12829 197 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TPSB2P20231 275 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 PHBP35232 272 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ELK3P41970 407 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 MAGEA6P43360 314 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ZBTB17Q13105 803 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TPSAB1Q15661 275 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TEX44Q53QW1 395 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 PPM1LQ5SGD2 360 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 C9orf50Q5SZB4 431 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 AGBL2Q5U5Z8 902 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TXNDC8Q6A555 127 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ITPRIPL1Q6GPH6 555 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 TMEM150AQ86TG1 271 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 CFAP52Q8N1V2 620 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 PDCD7Q8N8D1 485 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 ARL14EPQ8N8R7 260 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 ATP11CQ8NB49 1132 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 MCUQ8NE86 351 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 MRPS31Q92665 395 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 CFAP36Q96G28 342 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 KLF16Q9BXK1 252 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 ROPN1BQ9BZX4 212 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 PHACTR1Q9C0D0 580 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ATXN3LQ9H3M9 355 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 ROPN1Q9HAT0 212 aaPredicted RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 TRHDEQ9UKU6 1024 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 NOVA2Q9UNW9 492 aaKnown RBP8.85□□□□□ -0.99
TDP1-203ENST00000393454 DOCK4Q8N1I0 1966 aa8.85□□□□□ -0.99
TDP1-203ENST00000393454 IGLV3-10A0A075B6K4 115 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 EXOC1LA0A1B0GW35 172 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 ARHGAP42A6NI28 874 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 RASA4BC9J798 803 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 MATN3O15232 486 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 RASA4O43374 803 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 STC2O76061 302 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 IVLP07476 585 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 ABHD2P08910 425 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CCNB1P14635 433 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 HDCP19113 662 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 NFKB1P19838 968 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SSTR1P30872 391 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 OR1E1P30953 314 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SLC6A4P31645 630 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 HPDP32754 393 aaPredicted RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 NDST2P52849 883 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SMAD3P84022 425 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 CYP4F8P98187 520 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 ZNF33AQ06730 810 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SPARCL1Q14515 664 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 PRPSAP1Q14558 356 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 STAT4Q14765 748 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CCDC38Q502W7 563 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 RABGAP1LQ5R372 815 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 TIGD7Q6NT04 549 aaPredicted RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 C3orf62Q6ZUJ4 267 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 CAND1Q86VP6 1230 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 UMODL1-AS1Q8N2C9 162 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 SLC22A17Q8WUG5 538 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 MRRFQ96E11 262 aaKnown RBP8.84□□□□□ -0.99
TDP1-203ENST00000393454 MYEOVQ96EZ4 313 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 HMCESQ96FZ2 354 aa8.84□□□□□ -0.99
TDP1-203ENST00000393454 TSGA13Q96PP4 275 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms