RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ZYG11BQ9C0D3 744 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 NOL6Q9H6R4 1146 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-203ENST00000389980 NCAM2O15394 837 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 ACSL4O60488 711 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 EPCAMP16422 314 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 MX2P20592 715 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 TACR2P21452 398 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 PTPN3P26045 913 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 CORO1AP31146 461 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 HTR7P34969 479 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 HARS2P49590 506 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 COG7P83436 770 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 ICE2Q659A1 982 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 CCDC149Q6ZUS6 474 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 PID1Q7Z2X4 250 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 HOOK3Q86VS8 718 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 TMC8Q8IU68 726 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 ZBED8Q8IZ13 594 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 LGI2Q8N0V4 545 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 SH3GL2Q99962 352 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 KLF16Q9BXK1 252 aaPredicted RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 LRRC3Q9BY71 257 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 CENPHQ9H3R5 247 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 RWDD3Q9Y3V2 267 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 RAD54BQ9Y620 910 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 A0A1W2PRU2 124 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 STK10O94804 968 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 TTC4O95801 387 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 MYL4P12829 197 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 PSMB4P28070 264 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 GRIA1P42261 906 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 BBS9Q3SYG4 887 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 KCTD16Q68DU8 428 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 TRMT10CQ7L0Y3 403 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 SRLQ86TD4 932 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 RBM23Q86U06 439 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 ATPAF2Q8N5M1 289 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 ZFRQ96KR1 1074 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 AGAP3Q96P47 875 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 WDR83Q9BRX9 315 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 MAN1C1Q9NR34 630 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 KLHL8Q9P2G9 620 aaPredicted RBP12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 XIRP2A4UGR9 3374 aa12.5□□□□□ -0.41
SPTBN1-203ENST00000389980 GOLGA6CA6NDK9 693 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 CHADO15335 359 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 JCHAINP01591 159 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 GOLGA6DP0CG33 693 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 RHOQP17081 205 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 HDCP19113 662 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PPP3CCP48454 512 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SGSHP51688 502 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ARL4CP56559 192 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SPDYCQ5MJ68 293 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PPM1LQ5SGD2 360 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 LRIG3Q6UXM1 1119 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ZSCAN18Q8TBC5 510 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 TGS1Q96RS0 853 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ATXN3LQ9H3M9 355 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 TMEM248Q9NWD8 314 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 GOLGA6AQ9NYA3 693 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PPARGC1AQ9UBK2 798 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 AGO1Q9UL18 857 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ASB3Q9Y575 518 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 NOTCH4Q99466 2003 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 DRGXA6NNA5 263 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 WASH4PA8MWX3 477 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 E7EVH7 732 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 F5H5T6 163 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 OPA1O60313 960 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 TSPAN3O60637 253 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 MAFKO60675 156 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 LPXNO60711 386 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 OPHN1O60890 802 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 NUDT17P0C025 328 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 CD68P34810 354 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 CCR2P41597 374 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SLC11A2P49281 568 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 RPS24P62847 133 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PPARDQ03181 441 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 UBE3AQ05086 875 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms