RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 UBL4BQ8N7F7 174 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 RTL3Q8N8U3 475 aaKnown RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 TERB1Q8NA31 727 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 EXD1Q8NHP7 514 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 SHDQ96IW2 340 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 GGA2Q9UJY4 613 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 MTF2Q9Y483 593 aaPredicted RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 KIAA1549LQ6ZVL6 1849 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 A0A0D9SEW6 157 aa13□□□□□ -0.33
SMN2-203ENST00000380743 KANSL1LA0AUZ9 987 aa13□□□□□ -0.33
SMN2-203ENST00000380743 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
SMN2-203ENST00000380743 K7EQS6 105 aa13□□□□□ -0.33
SMN2-203ENST00000380743 DCLK1O15075 740 aa13□□□□□ -0.33
SMN2-203ENST00000380743 KIF5CO60282 957 aa13□□□□□ -0.33
SMN2-203ENST00000380743 PDGFBP01127 241 aaPredicted RBP13□□□□□ -0.33
SMN2-203ENST00000380743 EGFP01133 1207 aa13□□□□□ -0.33
SMN2-203ENST00000380743 RHOCP08134 193 aa13□□□□□ -0.33
SMN2-203ENST00000380743 PYGMP11217 842 aa13□□□□□ -0.33
SMN2-203ENST00000380743 CSKP41240 450 aa13□□□□□ -0.33
SMN2-203ENST00000380743 CDKN2BP42772 138 aa13□□□□□ -0.33
SMN2-203ENST00000380743 MAPKAPK2P49137 400 aa13□□□□□ -0.33
SMN2-203ENST00000380743 GRSF1Q12849 480 aaKnown RBP eCLIP13□□□□□ -0.33
SMN2-203ENST00000380743 LLGL1Q15334 1064 aa13□□□□□ -0.33
SMN2-203ENST00000380743 TAZQ16635 292 aa13□□□□□ -0.33
SMN2-203ENST00000380743 C6orf118Q5T5N4 469 aa13□□□□□ -0.33
SMN2-203ENST00000380743 DCAF12L1Q5VU92 463 aa13□□□□□ -0.33
SMN2-203ENST00000380743 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
SMN2-203ENST00000380743 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
SMN2-203ENST00000380743 VSIG1Q86XK7 387 aa13□□□□□ -0.33
SMN2-203ENST00000380743 APCDD1Q8J025 514 aa13□□□□□ -0.33
SMN2-203ENST00000380743 SLC35F6Q8N357 371 aa13□□□□□ -0.33
SMN2-203ENST00000380743 PQLC3Q8N755 202 aa13□□□□□ -0.33
SMN2-203ENST00000380743 DDX51Q8N8A6 666 aaKnown RBP eCLIP13□□□□□ -0.33
SMN2-203ENST00000380743 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
SMN2-203ENST00000380743 NETO2Q8NC67 525 aa13□□□□□ -0.33
SMN2-203ENST00000380743 ALG14Q96F25 216 aa13□□□□□ -0.33
SMN2-203ENST00000380743 RNF157Q96PX1 679 aa13□□□□□ -0.33
SMN2-203ENST00000380743 FEM1AQ9BSK4 669 aa13□□□□□ -0.33
SMN2-203ENST00000380743 TLR10Q9BXR5 811 aa13□□□□□ -0.33
SMN2-203ENST00000380743 FOXQ1Q9C009 403 aa13□□□□□ -0.33
SMN2-203ENST00000380743 KLC2Q9H0B6 622 aa13□□□□□ -0.33
SMN2-203ENST00000380743 NOL6Q9H6R4 1146 aaKnown RBP13□□□□□ -0.33
SMN2-203ENST00000380743 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
SMN2-203ENST00000380743 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
SMN2-203ENST00000380743 INTS6Q9UL03 887 aaKnown RBP13□□□□□ -0.33
SMN2-203ENST00000380743 NDRG2Q9UN36 371 aaKnown RBP13□□□□□ -0.33
SMN2-203ENST00000380743 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
SMN2-203ENST00000380743 OR51B4Q9Y5P0 310 aa13□□□□□ -0.33
SMN2-203ENST00000380743 TECTAO75443 2155 aa13□□□□□ -0.33
SMN2-203ENST00000380743 ILVBLA1L0T0 632 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 ENC1O14682 589 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 APODP05090 189 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 PABPC1P11940 636 aaKnown RBP12.99□□□□□ -0.33
SMN2-203ENST00000380743 KRT10P13645 584 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 DRD1P21728 446 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 TARSP26639 723 aaKnown RBP12.99□□□□□ -0.33
SMN2-203ENST00000380743 ADCY2Q08462 1091 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 CCINQ13939 588 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 RPS6KA1Q15418 735 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 FUT11Q495W5 492 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 PREPLQ4J6C6 727 aaPredicted RBP12.99□□□□□ -0.33
SMN2-203ENST00000380743 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 SPOCD1Q6ZMY3 1216 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 CCDC50Q8IVM0 306 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
SMN2-203ENST00000380743 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 NPWQ8N729 165 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 RBM41Q96IZ5 413 aaKnown RBP12.99□□□□□ -0.33
SMN2-203ENST00000380743 MUC3BQ9H195 1237 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 LTB4R2Q9NPC1 389 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 DMDP11532 3685 aa12.99□□□□□ -0.33
SMN2-203ENST00000380743 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 STK25O00506 426 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 RAMP2O60895 175 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 TNFRSF4P43489 277 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 PLK1P53350 603 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 GNA12Q03113 381 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 ZNF211Q13398 564 aaPredicted RBP12.98□□□□□ -0.33
SMN2-203ENST00000380743 FZD5Q13467 585 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 POLD3Q15054 466 aaPredicted RBP12.98□□□□□ -0.33
SMN2-203ENST00000380743 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 PITRM1Q5JRX3 1037 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 AFMIDQ63HM1 303 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 ZNF783Q6ZMS7 281 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 TP53INP2Q8IXH6 220 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 OR7D4Q8NG98 312 aa12.98□□□□□ -0.33
SMN2-203ENST00000380743 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms