RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ZNF33AQ06730 810 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 FRG1Q14331 258 aaKnown RBP22.07■■□□□ 1.12
TRIM54-202ENST00000380075 CRYMQ14894 314 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 CDHR3Q6ZTQ4 885 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 ADAM32Q8TC27 787 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 PAAF1Q9BRP4 392 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 FTHL17Q9BXU8 183 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 LRMDAQ9H2I8 198 aa22.07■■□□□ 1.12
TRIM54-202ENST00000380075 LAMA3Q16787 3333 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 ENPP3O14638 875 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 BIRC5O15392 142 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 UGT1A9O60656 530 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 POLBP06746 335 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 BGNP21810 368 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 MGAT1P26572 445 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 SESN2P58004 480 aaPredicted RBP22.06■■□□□ 1.12
TRIM54-202ENST00000380075 GALNT2Q10471 571 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 BMPR2Q13873 1038 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 SPANXN3Q5MJ09 141 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 ITPRIPL1Q6GPH6 555 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 DCLRE1AQ6PJP8 1040 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 THEM5Q8N1Q8 247 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 TMEM237Q96Q45 408 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 PKMYT1Q99640 499 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 TUBB6Q9BUF5 446 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 UGT1A7Q9HAW7 530 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 UGT1A10Q9HAW8 530 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 UGT1A8Q9HAW9 530 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 ANLNQ9NQW6 1124 aa22.06■■□□□ 1.12
TRIM54-202ENST00000380075 CXXC1Q9P0U4 656 aaPredicted RBP22.06■■□□□ 1.12
TRIM54-202ENST00000380075 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.05■■□□□ 1.12
TRIM54-202ENST00000380075 HMX2A2RU54 273 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 I3L4J1 428 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 INPPL1O15357 1258 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 AP2A1O95782 977 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 TYMPP19971 482 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 SWT1Q5T5J6 900 aaKnown RBP22.05■■□□□ 1.12
TRIM54-202ENST00000380075 MROH9Q5TGP6 573 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 BSPRYQ5W0U4 402 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.05■■□□□ 1.12
TRIM54-202ENST00000380075 C7orf26Q96N11 449 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 OSBPL2Q9H1P3 480 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 SIRPGQ9P1W8 387 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 ZFP69BQ9UJL9 534 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 ABHD14A-ACY1A0A1B0GW23 586 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 I6L893 689 aaPredicted RBP22.05■■□□□ 1.12
TRIM54-202ENST00000380075 AP3B1O00203 1094 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 POMCP01189 267 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 HTR7P34969 479 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 CDK18Q07002 472 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 SHHQ15465 462 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 KYAT3Q6YP21 454 aaKnown RBP22.05■■□□□ 1.12
TRIM54-202ENST00000380075 CCDC91Q7Z6B0 441 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 NDUFAF2Q8N183 169 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 RSPH1Q8WYR4 309 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 TRIM56Q9BRZ2 755 aaKnown RBP22.05■■□□□ 1.12
TRIM54-202ENST00000380075 TKTL2Q9H0I9 626 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 GBA3Q9H227 469 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 LRRC40Q9H9A6 602 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 RGS18Q9NS28 235 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 OR12D3Q9UGF7 316 aa22.05■■□□□ 1.12
TRIM54-202ENST00000380075 ZBBXA8MT70 800 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 DNAJC6O75061 913 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 BDNFP23560 247 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 ARFIP2P53365 341 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 RABGGTBP53611 331 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 COG7P83436 770 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 TSPY1Q01534 308 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 CD300LGQ6UXG3 332 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 PACS1Q6VY07 963 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 HERVK_113Q902F9 699 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 SUSD3Q96L08 255 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 ALG13Q9NP73 1137 aaKnown RBP22.04■■□□□ 1.12
TRIM54-202ENST00000380075 PCMTD2Q9NV79 361 aa22.04■■□□□ 1.12
TRIM54-202ENST00000380075 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 KCNK1O00180 336 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 HGSO14964 777 aaPredicted RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 BAIAP3O94812 1187 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 IBSPP21815 317 aaPredicted RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 GARSP41250 739 aaKnown RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 OVOS1Q6IE37 1185 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 CHRDL2Q6WN34 429 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 TAC4Q86UU9 113 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 RFWD2Q8NHY2 731 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 EDEM1Q92611 657 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 ATP2A3Q93084 1043 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 E2F7Q96AV8 911 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 CEP41Q9BYV8 373 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 SLC13A1Q9BZW2 595 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 NOD2Q9HC29 1040 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 SYBUQ9NX95 663 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 BFARQ9NZS9 450 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 TRAFD1O14545 582 aaPredicted RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 IGLV3-25P01717 112 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 KRT16P08779 473 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 DNAJB2P25686 324 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 BRCC3P46736 316 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 WDR5P61964 334 aaKnown RBP22.03■■□□□ 1.12
TRIM54-202ENST00000380075 OVGP1Q12889 678 aa22.03■■□□□ 1.12
TRIM54-202ENST00000380075 BRMS1LQ5PSV4 323 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms