RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NAPEPLDQ6IQ20 393 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 LCLAT1Q6UWP7 414 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 GPR155Q7Z3F1 870 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 ZNF605Q86T29 641 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 PRPF39Q86UA1 669 aaKnown RBP18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 CIR1Q86X95 450 aaPredicted RBP18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 SCML4Q8N228 414 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 SLC35F5Q8WV83 523 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 TSC1Q92574 1164 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 FGF11Q92914 225 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 SERPINB11Q96P15 392 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 ST7Q9NRC1 585 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 NAALADL1Q9UQQ1 740 aa18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 TDRD6O60522 2096 aaKnown RBP18.38■□□□□ 0.53
PDLIM4-202ENST00000379018 CAPN9O14815 690 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 APOEP02649 317 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 PDGFRAP16234 1089 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 ACTN2P35609 894 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 DAB2P98082 770 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 TAC4Q86UU9 113 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 OXR1Q8N573 874 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 UBR7Q8N806 425 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 SNIP1Q8TAD8 396 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 PTPRN2Q92932 1015 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 LGMNQ99538 433 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 TSG101Q99816 390 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 ZSWIM1Q9BR11 485 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 IRX2Q9BZI1 471 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 GOLPH3LQ9H4A5 285 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 TJP2Q9UDY2 1190 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 ITIH6Q6UXX5 1313 aa18.37■□□□□ 0.53
PDLIM4-202ENST00000379018 BNIP3LO60238 219 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 FBXO21O94952 628 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 DRD3P35462 400 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 NNMTP40261 264 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 INSM1Q01101 510 aaPredicted RBP18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 ELAVL3Q14576 367 aaKnown RBP18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 ARID5BQ14865 1188 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 ACCSLQ4AC99 568 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 TAF1BQ53T94 588 aaPredicted RBP18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 SFMBT2Q5VUG0 894 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 SPACA3Q8IXA5 215 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 PPM1KQ8N3J5 372 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 ZNF843Q8N446 348 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 MFSD2AQ8NA29 543 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 KDM1BQ8NB78 822 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 KAT5Q92993 513 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 AZIN2Q96A70 460 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 KIAA1257Q9ULG3 409 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 TLR6Q9Y2C9 796 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 COQ4Q9Y3A0 265 aa18.36■□□□□ 0.53
PDLIM4-202ENST00000379018 RNF225M0QZC1 329 aaPredicted RBP18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 FFAR2O15552 330 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 SIGLEC6O43699 453 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 FYNP06241 537 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 PAEPP09466 180 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 TACR2P21452 398 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 RXRGP48443 463 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 KRT85P78386 507 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 TLE3Q04726 772 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 ILKQ13418 452 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 STAT4Q14765 748 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 KLK6Q92876 244 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 SNX21Q969T3 373 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 NT5C1BQ96P26 610 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 ERVMER34-1Q9H9K5 563 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 CYTH4Q9UIA0 394 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 PCDHB1Q9Y5F3 818 aa18.35■□□□□ 0.53
PDLIM4-202ENST00000379018 ASH1LQ9NR48 2969 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 SYNJ2BP-COX16A0A087WUM0 186 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 TEX51A0A1B0GUA7 166 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 TRIM49BA6NDI0 452 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 TRIM38O00635 465 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 SLC16A3O15427 465 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 LATO43561 262 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 ZNF202O95125 648 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 MT-CO3P00414 261 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 PRCPP42785 496 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 KCNH2Q12809 1159 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 PNOCQ13519 176 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 CNGA2Q16280 664 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 TBC1D25Q3MII6 688 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 HS1BP3Q53T59 392 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 SYPL2Q5VXT5 272 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 KANSL1Q7Z3B3 1105 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 ERICH1Q86X53 443 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 OR8D1Q8WZ84 308 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 HSFY1Q96LI6 401 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 SPAG5Q96R06 1193 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 CAAP1Q9H8G2 361 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 ARMCX3Q9UH62 379 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 SARDHQ9UL12 918 aa18.34■□□□□ 0.53
PDLIM4-202ENST00000379018 ZNF462Q96JM2 2506 aa18.33■□□□□ 0.53
PDLIM4-202ENST00000379018 F5H5T6 163 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 MAGEC1O60732 1142 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 MPOP05164 745 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms