RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 URB1-AS1Q96HZ7 61 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 FAR2Q96K12 515 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PAAF1Q9BRP4 392 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 TMEM204Q9BSN7 226 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ISCUQ9H1K1 167 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 SLC39A10Q9ULF5 831 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PCDHA7Q9UN72 937 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PTGDR2Q9Y5Y4 395 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 LMTK3Q96Q04 1460 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 INAFM1C9JVW0 142 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 MDM4O15151 490 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 MSI1O43347 362 aaKnown RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 DNPH1O43598 174 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 NTSR2O95665 410 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 TBXAS1P24557 533 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PDLIM4P50479 330 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 POLE2P56282 527 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ZBTB16Q05516 673 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 TRIM14Q14142 442 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 GALNT3Q14435 633 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 DHX8Q14562 1220 aaKnown RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 BTBD16Q32M84 506 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 RINT1Q6NUQ1 792 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ERAP2Q6P179 960 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 TTC30AQ86WT1 665 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 TMEM217Q8N7C4 229 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 OR1N1Q8NGS0 311 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 POF1BQ8WVV4 589 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 CENPIQ92674 756 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ATP2A3Q93084 1043 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 CRB3Q9BUF7 120 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 SORBS1Q9BX66 1292 aaKnown RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 CCDC134Q9H6E4 229 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 TXNRD2Q9NNW7 524 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ARFGAP3Q9NP61 516 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ZNF335Q9H4Z2 1342 aaPredicted RBP2.46□□□□□ -2.01
VPS13A-206ENST00000376646 PRSS44E7EML9 344 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 I6L893 689 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 ASNA1O43681 348 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 TCEA3O75764 348 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 PAPSS2O95340 614 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 IFNA2P01563 188 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 GRK5P34947 590 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 PPM1AP35813 382 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 BTKQ06187 659 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 MYLK4Q86YV6 388 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 SPATA2LQ8IUW3 424 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 PRR26Q8N8Z3 221 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 CMASQ8NFW8 434 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 NUDCD2Q8WVJ2 157 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 BRI3BPQ8WY22 251 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 MUL1Q969V5 352 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 MED30Q96HR3 178 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 REXO5Q96IC2 774 aaKnown RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 NTPCRQ9BSD7 190 aaKnown RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 FRMD8Q9BZ67 464 aaPredicted RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 WDR12Q9GZL7 423 aaKnown RBP2.46□□□□□ -2.02
VPS13A-206ENST00000376646 HELLSQ9NRZ9 838 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 TBC1D14Q9P2M4 693 aa2.46□□□□□ -2.02
VPS13A-206ENST00000376646 TCRBV7S3A2A0A539 114 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 AGAP5A6NIR3 686 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 TNFRSF6BO95407 300 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 ALDOAP04075 364 aaKnown RBP2.45□□□□□ -2.02
VPS13A-206ENST00000376646 GYS1P13807 737 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 RFX2P48378 723 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 PCYT1AP49585 367 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 PMS2P54278 862 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 LTBQ06643 244 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 ASIC2Q16515 512 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 SLC4A8Q2Y0W8 1093 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 TTC39AQ5SRH9 613 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 C10orf76Q5T2E6 689 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 GGT6Q6P531 493 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 PARM1Q6UWI2 310 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 SLC16A12Q6ZSM3 486 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-206ENST00000376646 KDELC2Q7Z4H8 507 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 TRABD2AQ86V40 505 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 CCDC25Q86WR0 208 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 ADHFE1Q8IWW8 467 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 ENGASEQ8NFI3 743 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 PRPF18Q99633 342 aaKnown RBP2.45□□□□□ -2.02
VPS13A-206ENST00000376646 SFXN1Q9H9B4 322 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 NECTIN3Q9NQS3 549 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 MYO6Q9UM54 1294 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 MAGED2Q9UNF1 606 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-206ENST00000376646 LZTS1Q9Y250 596 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 LRCH1Q9Y2L9 728 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 RGS14O43566 566 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 PLA2G6O60733 806 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 NBNO60934 754 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 CPA1P15085 419 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 IGFBP2P18065 325 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 ALDH18A1P54886 795 aaKnown RBP2.45□□□□□ -2.02
VPS13A-206ENST00000376646 GPR18Q14330 331 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 TUBB8Q3ZCM7 444 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 PRAMEF19Q5SWL8 479 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 C18orf65Q6ZTR6 163 aa2.45□□□□□ -2.02
VPS13A-206ENST00000376646 NR2C2APQ86WQ0 139 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms