RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-206ENST00000376496 SLC22A12Q96S37 553 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 MLPHQ9BV36 600 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-206ENST00000376496 HERC2P3Q9BVR0 1158 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 DOCK6Q96HP0 2047 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 NDC80O14777 642 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 CDH16O75309 829 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 IVLP07476 585 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
CLCN6-206ENST00000376496 LINC00271P0C7V0 271 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 TPSB2P20231 275 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 MX2P20592 715 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 SLC6A4P31645 630 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 TPSAB1Q15661 275 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 PARP6Q2NL67 630 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 RTL3Q8N8U3 475 aaKnown RBP12.9□□□□□ -0.34
CLCN6-206ENST00000376496 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 PAFAH2Q99487 392 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 TTLL2Q9BWV7 592 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 CATSPERBQ9H7T0 1116 aa12.9□□□□□ -0.34
CLCN6-206ENST00000376496 ZNF334Q9HCZ1 680 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-206ENST00000376496 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
CLCN6-206ENST00000376496 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 GOLGA8RI6L899 631 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 J3KR12 359 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 EIF3HO15372 352 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MAFKO60675 156 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MT-CYBP00156 380 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 TPH1P17752 444 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 HOXC13P31276 330 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MMP13P45452 471 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PPP1R21Q6ZMI0 780 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 UNC5AQ6ZN44 842 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ATP6V0D2Q8N8Y2 350 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MAML1Q92585 1016 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 HMCESQ96FZ2 354 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 TRPC7Q9HCX4 862 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 SMYD2Q9NRG4 433 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 RASA4BC9J798 803 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 RASA4O43374 803 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 TCEA3O75764 348 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 CCNB1P14635 433 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 KRT15P19012 456 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ELF1P32519 619 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ATP5C1P36542 298 aaKnown RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 FDFT1P37268 417 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PSEN1P49768 467 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 NLRP14Q86W24 1093 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MCUQ8NE86 351 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 DPF3Q92784 378 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 FERMT1Q9BQL6 677 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 OLA1Q9NTK5 396 aaKnown RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 SYBUQ9NX95 663 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ALPK3Q96L96 1907 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 TMEM120BA0PK00 339 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 SMAPO00193 183 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 NCAM2O15394 837 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 FGF10O15520 208 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 IGLV3-27P01718 113 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 KLKB1P03952 638 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 SLC2A3P11169 496 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 BRAFP15056 766 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 GJA1P17302 382 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PHBP35232 272 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MAGEA3P43357 314 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 GEMIN4P57678 1058 aaKnown RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 RAB33AQ14088 237 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ARFGAP2Q8N6H7 521 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PPM1NQ8N819 430 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ZYG11BQ9C0D3 744 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 MCOLN1Q9GZU1 580 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 C12orf65Q9H3J6 166 aaKnown RBP12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PRKAG2Q9UGJ0 569 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 LGALS13Q9UHV8 139 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 PCDHB12Q9Y5F1 795 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 INSL5Q9Y5Q6 135 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
CLCN6-206ENST00000376496 DOCK4Q8N1I0 1966 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-206ENST00000376496 TSPAN3O60637 253 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 SGSHP51688 502 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 MAXP61244 160 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 FPGSQ05932 587 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
CLCN6-206ENST00000376496 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms