RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CAMKK2Q96RR4 588 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MKRN2Q9H000 416 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 E5RI56 91 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CHST10O43529 356 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 HS6ST1O60243 411 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 RFPL2O75678 378 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 HARS2P49590 506 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 IDO2Q6ZQW0 420 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 AURKBQ96GD4 344 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 PCDH9Q9HC56 1237 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TRAF6Q9Y4K3 522 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 C1orf196B1AJZ1 125 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 STX16-NPEPL1H3BU86 382 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 AKR1B1P15121 316 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CAND1Q86VP6 1230 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 MIB1Q86YT6 1006 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 SLC9A6Q92581 669 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 NXNL1Q96CM4 212 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 SRPK1Q96SB4 655 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 MMTAG2Q9BU76 263 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 FN3KQ9H479 309 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MEMO1Q9Y316 297 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ZNF532Q9HCE3 1301 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 PRSS44E7EML9 344 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 GJB6O95452 261 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 PRKAR2AP13861 404 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 SLC3A1Q07837 685 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TCEAL6Q6IPX3 200 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 METTL25Q8N6Q8 603 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 OR6P1Q8NGX9 317 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 FAM129BQ96TA1 746 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 KCNN2Q9H2S1 579 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 A6NHS1 94 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 HDAC3O15379 428 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 GMDSO60547 372 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MUTP22033 750 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MCPH1Q8NEM0 835 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 C7orf26Q96N11 449 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 DDX43Q9NXZ2 648 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 SORBS3O60504 671 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CNPP09543 421 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 RAB4AP20338 218 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ACADSBP45954 432 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CTBP2P56545 445 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TOB2Q14106 344 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 NRF1Q16656 503 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TMEM270Q6UE05 265 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 RIOX2Q8IUF8 465 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 RNF145Q96MT1 663 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ALOX15BO15296 676 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 RLN2P04090 185 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CSN2P05814 226 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 IMPDH1P20839 514 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MPP7Q5T2T1 576 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 NDUFAF5Q5TEU4 345 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 C3orf33Q6P1S2 294 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MFSD2AQ8NA29 543 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 EEF1AKMT1Q8WVE0 214 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 SLC38A2Q96QD8 506 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 MAT2BQ9NZL9 334 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 HNRNPDLO14979 420 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 DENRO43583 198 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 MPP1Q00013 466 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TAB3Q8N5C8 712 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 FEZF2Q8TBJ5 459 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ADAM32Q8TC27 787 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ZNF431Q8TF32 576 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 LRRC4BQ9NT99 713 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 OGDHLQ9ULD0 1010 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TRAPPC13A5PLN9 417 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 KLRC1P26715 233 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CDC25CP30307 473 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 NOMO3P69849 1222 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 FMR1Q06787 632 aaKnown RBP eCLIP6.73□□□□□ -1.333e-7■■■□□ 16.7
UBR4-204ENST00000375254 NOMO1Q15155 1222 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ZBTB6Q15916 424 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ESCO2Q56NI9 601 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 FAM131AQ6UXB0 335 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 KCTD8Q6ZWB6 473 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MAEAQ7L5Y9 396 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TBCKQ8TEA7 893 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TEFMQ96QE5 360 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 SENP6Q9GZR1 1112 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 ZSWIM5Q9P217 1185 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MALT1Q9UDY8 824 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ADAM28Q9UKQ2 775 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 DUSP12Q9UNI6 340 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 C2orf71A6NGG8 1288 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 MUSKO15146 869 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SLC7A1P30825 629 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 ERVK-24P63145 666 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 MRNIPQ6NTE8 343 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 SLC25A24Q6NUK1 477 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 EYA1Q99502 592 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms