RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CTAGE3PQ8IX95 158 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 AGGF1Q8N302 714 aaeCLIP15.96■□□□□ 0.15
CCDC40-202ENST00000374876 B3GALNT2Q8NCR0 500 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 HLA-CQ95604 372 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 FAM149B1Q96BN6 582 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 KLHL29Q96CT2 875 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 APOL5Q9BWW9 433 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 CLEC1BQ9P126 229 aa15.96■□□□□ 0.15
CCDC40-202ENST00000374876 ARHGEF37A1IGU5 675 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 WDR27A2RRH5 827 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 WDR91A4D1P6 747 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TBX10O75333 385 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 GLUD1P00367 558 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 KCNA5P22460 613 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 ARL4AP40617 200 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 SLC10A2Q12908 348 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 RAB33AQ14088 237 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 FYB2Q5VWT5 728 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 HEATR6Q6AI08 1181 aaKnown RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 LILRA6Q6PI73 481 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 LIMS2Q7Z4I7 341 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 SLC26A11Q86WA9 606 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 THEM5Q8N1Q8 247 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 C12orf76Q8N812 135 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 MCUQ8NE86 351 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 QKIQ96PU8 341 aaKnown RBP eCLIP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 MAGEB5Q9BZ81 275 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 UBE2ZQ9H832 354 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 POPDC2Q9HBU9 364 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 DDX43Q9NXZ2 648 aaKnown RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 SLC17A7Q9P2U7 560 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 PLXNA3P51805 1871 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TRDMT1O14717 391 aaKnown RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 CHUKO15111 745 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 METTL18O95568 372 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 ALADP13716 330 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 CPB1P15086 417 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 NQO1P15559 274 aaKnown RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 WARSP23381 471 aaKnown RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 SULT1E1P49888 294 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TFF2Q03403 129 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 ADIGQ0VDE8 80 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 COL19A1Q14993 1142 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 SLC25A52Q3SY17 297 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TTC39BQ5VTQ0 682 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 PRPF39Q86UA1 669 aaKnown RBP15.95■□□□□ 0.14
CCDC40-202ENST00000374876 PIGZQ86VD9 579 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 LRRTM3Q86VH5 581 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 LRRC6Q86X45 466 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 FAM131BQ86XD5 332 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 DEFB106AQ8N104 65 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TMEM86AQ8N2M4 240 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 CCDC33Q8N5R6 958 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 PPM1NQ8N819 430 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 ZNF461Q8TAF7 563 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 LRRC39Q96DD0 335 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 PGLYRP2Q96PD5 576 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 VPS11Q9H270 941 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TTLL3Q9Y4R7 772 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 TSC2P49815 1807 aa15.95■□□□□ 0.14
CCDC40-202ENST00000374876 GABRDO14764 452 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 DCTN3O75935 186 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 GOT1P17174 413 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 RNF19BQ6ZMZ0 732 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 OTOAQ7RTW8 1153 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 KREMEN2Q8NCW0 462 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 APOPT1Q96IL0 206 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 SERAC1Q96JX3 654 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 LRRC37BQ96QE4 947 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 HNRNPABQ99729 332 aaKnown RBP15.94■□□□□ 0.14
CCDC40-202ENST00000374876 DUSP16Q9BY84 665 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 C12orf65Q9H3J6 166 aaKnown RBP15.94■□□□□ 0.14
CCDC40-202ENST00000374876 MAN1C1Q9NR34 630 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 DTLQ9NZJ0 730 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 KRT37O76014 449 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 ABLIM3O94929 683 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 GSTA2P09210 222 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 PYGBP11216 843 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 TPSB2P20231 275 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 AMPD1P23109 780 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 SKIV2L2P42285 1042 aaKnown RBP15.94■□□□□ 0.14
CCDC40-202ENST00000374876 LHX1P48742 406 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 KCNJ2P63252 427 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 TPSAB1Q15661 275 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 DCAF6Q58WW2 860 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 LGSNQ5TDP6 509 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 NCBP2-AS2Q69YL0 99 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 TMEM184AQ6ZMB5 413 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 BZW1Q7L1Q6 419 aaKnown RBP15.94■□□□□ 0.14
CCDC40-202ENST00000374876 PYROXD2Q8N2H3 581 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 TFB1MQ8WVM0 346 aaKnown RBP15.94■□□□□ 0.14
CCDC40-202ENST00000374876 NDRG1Q92597 394 aaKnown RBP15.94■□□□□ 0.14
CCDC40-202ENST00000374876 CD248Q9HCU0 757 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 TXLNGQ9NUQ3 528 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 FZD10Q9ULW2 581 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 MAD1L1Q9Y6D9 718 aa15.94■□□□□ 0.14
CCDC40-202ENST00000374876 OR6C75A6NL08 312 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 DAB1O75553 588 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 RFPL2O75678 378 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms