RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 GABRG3Q99928 467 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 ABCB8Q9NUT2 735 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 TRHDEQ9UKU6 1024 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 A0A1W2PQ67 120 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 IGLV3-19P01714 112 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 STIP1P31948 543 aaKnown RBP11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 CHRNA3P32297 505 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 ITPRIPL2Q3MIP1 535 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 LRIG1Q96JA1 1093 aa11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 DUS2Q9NX74 493 aaKnown RBP11.46□□□□□ -0.57
CSGALNACT2-201ENST00000374466 LIASO43766 372 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GRAP2O75791 330 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KRT1P04264 644 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ADH5P11766 374 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TDGQ13569 410 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PDK1Q15118 436 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FBXO43Q4G163 708 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FAM131BQ86XD5 332 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KIF18AQ8NI77 898 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TRMT61BQ9BVS5 477 aaKnown RBP11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 IGFLR1Q9H665 355 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ATP13A1Q9HD20 1204 aa11.46□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FAM187AA6NFU0 413 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MAFKO60675 156 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PHF2O75151 1096 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CR2P20023 1033 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GARSP41250 739 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MARCKSL1P49006 195 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CDH6P55285 790 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 HNRNPDQ14103 355 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GRM3Q14832 879 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PARM1Q6UWI2 310 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MRGPRX3Q96LB0 322 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TUBGCP5Q96RT8 1024 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CPEB1Q9BZB8 566 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 USP29Q9HBJ7 922 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DTLQ9NZJ0 730 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SORCS3Q9UPU3 1222 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 NUMBLQ9Y6R0 609 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TARSL2A2RTX5 802 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MATN3O15232 486 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SUN1O94901 812 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CYBBP04839 570 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ERCC2P18074 760 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DRD1P21728 446 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TPI1P60174 286 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MRPS21P82921 87 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SLC45A4Q5BKX6 768 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 Q7L0L9 218 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CPNE8Q86YQ8 564 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CDKL3Q8IVW4 592 aaPredicted RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KCTD6Q8NC69 237 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FGF14Q92915 247 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 XPO6Q96QU8 1125 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 NELL2Q99435 816 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RIMKLBQ9ULI2 386 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PLXNA2O75051 1894 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ARHGAP42A6NI28 874 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CD160O95971 181 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CKMP06732 381 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 VCPP55072 806 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GNG11P61952 73 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ATP11AP98196 1134 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ADIPOR2Q86V24 386 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RELL1Q8IUW5 271 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MYEOVQ96EZ4 313 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CYP2S1Q96SQ9 504 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MGME1Q9BQP7 344 aa11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DOCK6Q96HP0 2047 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PTGIRP43119 386 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MAPK8P45983 427 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RENBPP51606 427 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DGKKQ5KSL6 1271 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GET4Q7L5D6 327 aaPredicted RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DENND1CQ8IV53 801 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 HERPUD2Q9BSE4 406 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TMEM245Q9H330 911 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 HAUS2Q9NVX0 235 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GOT1P17174 413 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GRIA2P42262 883 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RPL26P61254 145 aaKnown RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GNA12Q03113 381 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CEP112Q8N8E3 955 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PRELID2Q8N945 189 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MYO19Q96H55 970 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FRMD8Q9BZ67 464 aaPredicted RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KCNK12Q9HB15 430 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RPL26L1Q9UNX3 145 aaKnown RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TYW5A2RUC4 315 aaKnown RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ERI2A8K979 691 aaKnown RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PIK3R2O00459 728 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PSMD3O43242 534 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FTCDO95954 541 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms