RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 LIN7AO14910 233 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 FARP2O94887 1054 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 IFNGP01579 166 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 AP3S1Q92572 193 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CCDC154A6NI56 674 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CES2O00748 559 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 TCF4P15884 667 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 TUFMP49411 452 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CCDC153Q494R4 210 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MANSC4A6NHS7 340 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 FCHO1O14526 889 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CTNNB1P35222 781 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 BCL2L1Q07817 233 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 PDIA5Q14554 519 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 FAM171A1Q5VUB5 890 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 GLT6D1Q7Z4J2 308 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 OR56A4Q8NGH8 313 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 JSRP1Q96MG2 331 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 PSMD13Q9UNM6 376 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 TBX4P57082 545 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MRPS25P82663 173 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 HECTD3Q5T447 861 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 GPAMQ9HCL2 828 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 SAMD4AQ9UPU9 718 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 LOC100653049A0A140TA62 436 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CACNB4O00305 520 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MLYCDO95822 493 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 SERPINA1P01009 418 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CHRNGP07510 517 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CTCFP49711 727 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MMP14P50281 582 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 SWI5Q1ZZU3 235 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 GPAT3Q53EU6 434 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 UBA3Q8TBC4 463 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ZDHHC6Q9H6R6 413 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CHMP1AQ9HD42 196 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CPSF1Q10570 1443 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 HYKKA2RU49 373 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 EIF3HO15372 352 aaKnown RBP eCLIP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 SNAP47Q5SQN1 464 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 RAET1GQ6H3X3 334 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MYOZ2Q9NPC6 264 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ST3GAL5Q9UNP4 418 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 FAM172AQ8WUF8 416 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 TBATAQ96M53 351 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 USB1Q9BQ65 265 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CYP4F12Q9HCS2 524 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 RDH8Q9NYR8 311 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 RRN3Q9NYV6 651 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 NDUFA9Q16795 377 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ARMC12Q5T9G4 340 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 PAPD7Q5XG87 772 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MYLPFQ96A32 169 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 SERPINA4P29622 427 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 DUS1LQ6P1R4 473 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 LRRC70Q7Z2Q7 622 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ANKFN1Q8N957 763 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 PRICKLE1Q96MT3 831 aaPredicted RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 PDP2Q9P2J9 529 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 SNRNP200O75643 2136 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 CST8O60676 142 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ULK1O75385 1050 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ADH1AP07327 375 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 MTHFD1P11586 935 aaKnown RBP9.25□□□□□ -0.93
CSMD2-205ENST00000373381 NME5P56597 212 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 RASGEF1BQ0VAM2 473 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 VPS72Q15906 364 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 GLRA4Q5JXX5 417 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 TMEM68Q96MH6 324 aa9.25□□□□□ -0.93
CSMD2-205ENST00000373381 ZNF589Q86UQ0 364 aaPredicted RBP9.24□□□□□ -0.93
CSMD2-205ENST00000373381 CCDC36Q8IYA8 594 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 TAF6LQ9Y6J9 622 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 RGS10O43665 173 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 MPPE1Q53F39 396 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 GPSM1Q86YR5 675 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 SERPINB11Q96P15 392 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 FICDQ9BVA6 458 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 TPRKBQ9Y3C4 175 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 CASTOR2A6NHX0 329 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 CRATP43155 626 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 ZBTB49Q6ZSB9 765 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 DNAJC9Q8WXX5 260 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 CHID1Q9BWS9 393 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 TMEM216Q9P0N5 145 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 AMACRQ9UHK6 382 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 SNX13Q9Y5W8 968 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 ITPKBP27987 946 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 INO80DQ53TQ3 878 aaPredicted RBP9.24□□□□□ -0.93
CSMD2-205ENST00000373381 SLC9A4Q6AI14 798 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 FBXO38Q6PIJ6 1188 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 ROPN1BQ9BZX4 212 aaPredicted RBP9.24□□□□□ -0.93
CSMD2-205ENST00000373381 ROPN1Q9HAT0 212 aaPredicted RBP9.24□□□□□ -0.93
CSMD2-205ENST00000373381 QSOX1O00391 747 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 ACAT1P24752 427 aaKnown RBP9.24□□□□□ -0.93
CSMD2-205ENST00000373381 IST1P53990 364 aa9.24□□□□□ -0.93
CSMD2-205ENST00000373381 DNAJC3Q13217 504 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms