RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 VPS18Q9P253 973 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.23■□□□□ 0.35
PHGDH-202ENST00000369409 E7EVH7 732 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 F5H5T6 163 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CCL16O15467 120 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 MTSS1O43312 755 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 MYZAPP0CAP1 466 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 TPSB2P20231 275 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 SLC6A4P31645 630 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 FDFT1P37268 417 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 SLC11A2P49281 568 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 SHHQ15465 462 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 TPSAB1Q15661 275 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 BBS9Q3SYG4 887 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 FAM133BQ5BKY9 247 aaKnown RBP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 AFMIDQ63HM1 303 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 RFWD3Q6PCD5 774 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 PPP1R21Q6ZMI0 780 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 LGI2Q8N0V4 545 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 ELMOD1Q8N336 334 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 KLF16Q9BXK1 252 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CENPHQ9H3R5 247 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 NOL6Q9H6R4 1146 aaKnown RBP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CHD5Q8TDI0 1954 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CEP290O15078 2479 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 E7ESA3 106 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 EIF3HO15372 352 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CAMK1Q14012 370 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 PABPC1LQ4VXU2 614 aaKnown RBP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 PPM1LQ5SGD2 360 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CAPN12Q6ZSI9 719 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 GAREM2Q75VX8 874 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 PID1Q7Z2X4 250 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 WBP2Q969T9 261 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 TTC25Q96NG3 672 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 CYP2S1Q96SQ9 504 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 WDR83Q9BRX9 315 aaKnown RBP17.22■□□□□ 0.35
PHGDH-202ENST00000369409 TMBIM4Q9HC24 238 aa17.22■□□□□ 0.35
PHGDH-202ENST00000369409 SMIM23A6NLE4 172 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 DRGXA6NNA5 263 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 ALOX15BO15296 676 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 MAFKO60675 156 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 KLKB1P03952 638 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 RB1P06400 928 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 LMAN1P49257 510 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 ZNF33AQ06730 810 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 KCTD16Q68DU8 428 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 UMODL1-AS1Q8N2C9 162 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 EPS8L3Q8TE67 593 aaKnown RBP17.21■□□□□ 0.35
PHGDH-202ENST00000369409 USP33Q8TEY7 942 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 ZFRQ96KR1 1074 aaKnown RBP17.21■□□□□ 0.35
PHGDH-202ENST00000369409 AGAP3Q96P47 875 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 TSGA13Q96PP4 275 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 CORO1BQ9BR76 489 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 LRRC3Q9BY71 257 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 MAN1C1Q9NR34 630 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 ZNF212Q9UDV6 495 aa17.21■□□□□ 0.35
PHGDH-202ENST00000369409 AVILO75366 819 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 CCNCP24863 283 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 PAPOLAP51003 745 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 NDST2P52849 883 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 ZNF534Q76KX8 674 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 CFAP52Q8N1V2 620 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 FBXO36Q8NEA4 188 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 MRPS31Q92665 395 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 HMCESQ96FZ2 354 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 DONSONQ9NYP3 566 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 RSPH14Q9UHP6 348 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 CHMP2BQ9UQN3 213 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 GOLGA6CA6NDK9 693 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 NRG2O14511 850 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 RFPL2O75678 378 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 OLFM2O95897 454 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 JCHAINP01591 159 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 GOLGA6DP0CG33 693 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 MYL4P12829 197 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 NFKB1P19838 968 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 GYS2P54840 703 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 TEX44Q53QW1 395 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 CAND1Q86VP6 1230 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 SH2D3CQ8N5H7 860 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 PDCD7Q8N8D1 485 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 MCUQ8NE86 351 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 PRICKLE1Q96MT3 831 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 GCNAQ96QF7 691 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 TGS1Q96RS0 853 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 VAT1Q99536 393 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 FRMD8Q9BZ67 464 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 GBA3Q9H227 469 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 VPS37BQ9H9H4 285 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 ASAH2Q9NR71 780 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 GOLGA6AQ9NYA3 693 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms