RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LYPLA2O95372 231 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 PGM3O95394 542 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 MYL4P12829 197 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 TSHRP16473 764 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 GOT1P17174 413 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 FGFR3P22607 806 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 POU1F1P28069 291 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 BDH2Q9BUT1 245 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ACE2Q9BYF1 805 aaPredicted RBP13.97□□□□□ -0.17
VCP-201ENST00000358901 ZMYM2Q9UBW7 1377 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 LINC00854A0A1B0GVQ3 168 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 CCNE2O96020 404 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ATP4AP20648 1035 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ADORA2AP29274 412 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 PGS1Q32NB8 556 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 B3GALNT2Q8NCR0 500 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 FAM13CQ8NE31 585 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 FIG4Q92562 907 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 HSFY1Q96LI6 401 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 TBL1YQ9BQ87 522 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ADGRE3Q9BY15 652 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 RMND5AQ9H871 391 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 PCDHB7Q9Y5E2 793 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 CXCL11O14625 94 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ITGA2BP08514 1039 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 RGS2P41220 211 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 MMP14P50281 582 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 RTP1P59025 263 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 IL5RAQ01344 420 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 CCDC92Q53HC0 331 aaPredicted RBP13.97□□□□□ -0.17
VCP-201ENST00000358901 WSCD1Q658N2 575 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ARCQ7LC44 396 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 CLNKQ7Z7G1 428 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 UNC93AQ86WB7 457 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 CARNMT1Q8N4J0 409 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 C12orf65Q9H3J6 166 aaKnown RBP13.97□□□□□ -0.17
VCP-201ENST00000358901 ABHD16BQ9H3Z7 469 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 RERGLQ9H628 205 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 ANKRD6Q9Y2G4 727 aa13.97□□□□□ -0.17
VCP-201ENST00000358901 A8MUI8 341 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 LRPAP1P30533 357 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 FAM98BQ52LJ0 330 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 NET1Q7Z628 596 aaPredicted RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 C11orf74Q86VG3 221 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 OMDQ99983 421 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 DPY30Q9C005 99 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 PHACTR1Q9C0D0 580 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 NFASCO94856 1347 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 BUD23O43709 281 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 LYPLA1O75608 230 aaPredicted RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 CREB1P16220 341 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 NFKB1P19838 968 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 ATP6V1C1P21283 382 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 DNAJB2P25686 324 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 FRG1Q14331 258 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 ANKS3Q6ZW76 656 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 TTC7BQ86TV6 843 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 ZNF410Q86VK4 478 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 MBOAT7Q96N66 472 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 ZNF670Q9BS34 389 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 ARL8BQ9NVJ2 186 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 TRPM5Q9NZQ8 1165 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 CDV3Q9UKY7 258 aaKnown RBP13.96□□□□□ -0.17
VCP-201ENST00000358901 FAM50BQ9Y247 325 aa13.96□□□□□ -0.17
VCP-201ENST00000358901 PRR5-ARHGAP8B1AHC4 643 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 HDAC3O15379 428 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 CCNT2O60583 730 aaKnown RBP13.96□□□□□ -0.18
VCP-201ENST00000358901 MBL2P11226 248 aaPredicted RBP13.96□□□□□ -0.18
VCP-201ENST00000358901 COX4I1P13073 169 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 ANPEPP15144 967 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 EPHA3P29320 983 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 CCT8P50990 548 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 JAM2P57087 298 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 ARHGAP8P85298 464 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 CMC1Q7Z7K0 106 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 C11orf96Q7Z7L8 435 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 DHRSXQ8N5I4 330 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 OSCP1Q8WVF1 389 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 VPS33AQ96AX1 596 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 ZFRQ96KR1 1074 aaKnown RBP13.96□□□□□ -0.18
VCP-201ENST00000358901 NMUR2Q9GZQ4 415 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 FAM192AQ9GZU8 254 aa13.96□□□□□ -0.18
VCP-201ENST00000358901 C1orf232A0A0U1RR37 186 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CCDC159P0C7I6 412 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 ERCC2P18074 760 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 HALP42357 657 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CCNG1P51959 295 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 MAPK10P53779 464 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 TMEM132BQ14DG7 1078 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CCDC103Q8IW40 242 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 ULK2Q8IYT8 1036 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 ACMSDQ8TDX5 336 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 VTA1Q9NP79 307 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms