RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KRBA1A5PL33 1030 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 MZF1P28698 734 aaPredicted RBP15.26■□□□□ 0.03
CCNE1-202ENST00000357943 EIF2DP41214 584 aaKnown RBP15.26■□□□□ 0.03
CCNE1-202ENST00000357943 CSKP41240 450 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 GALK1P51570 392 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 COPS2P61201 443 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 DYNLT1P63172 113 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 AMPD2Q01433 879 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 KDSRQ06136 332 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 MLF2Q15773 248 aaPredicted RBP15.26■□□□□ 0.03
CCNE1-202ENST00000357943 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 GEN1Q17RS7 908 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 SLC9A4Q6AI14 798 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 TMCO3Q6UWJ1 677 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 SYT10Q6XYQ8 523 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 SETD3Q86TU7 594 aaPredicted RBP15.26■□□□□ 0.03
CCNE1-202ENST00000357943 SFTPA1Q8IWL2 248 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 TP53INP2Q8IXH6 220 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 PLD5Q8N7P1 536 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
CCNE1-202ENST00000357943 CELF6Q96J87 481 aaKnown RBP15.26■□□□□ 0.03
CCNE1-202ENST00000357943 OSBPL8Q9BZF1 889 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 CARD9Q9H257 536 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 RETREG1Q9H6L5 497 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 ARHGEF3Q9NR81 526 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 WNT16Q9UBV4 365 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 FBXL21Q9UKT6 434 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 DOCK4Q8N1I0 1966 aa15.26■□□□□ 0.03
CCNE1-202ENST00000357943 CST8O60676 142 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 GLULP15104 373 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PON2Q15165 354 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 GRAMD4Q6IC98 578 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 APCDD1Q8J025 514 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 UMODL1-AS1Q8N2C9 162 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ZNF557Q8N988 423 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 TERB1Q8NA31 727 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 OR7D4Q8NG98 312 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ALG14Q96F25 216 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PNKPQ96T60 521 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 NAPGQ99747 312 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 P2RY13Q9BPV8 354 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 KIAA1522Q9P206 1035 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 GGA2Q9UJY4 613 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 INTS6Q9UL03 887 aaKnown RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 SLC27A6Q9Y2P4 619 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 F5P12259 2224 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ILVBLA1L0T0 632 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ANTXRLA6NF34 631 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PRRT4C9JH25 899 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 APOL1O14791 398 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 MFSD11O43934 449 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 RAMP2O60895 175 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 MAP3K6O95382 1288 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PABPC1P11940 636 aaKnown RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PTPN7P35236 360 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ACVRL1P37023 503 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ZXDAP98168 799 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 GNA12Q03113 381 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 GBE1Q04446 702 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 PAFAH1B3Q15102 231 aaKnown RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 FUT11Q495W5 492 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 SEL1L2Q5TEA6 688 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 RNF219Q5W0B1 726 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 TMEM215Q68D42 235 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 KIAA0907Q7Z7F0 614 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 ARHGAP12Q8IWW6 846 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 FAM3CQ92520 227 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 FEM1AQ9BSK4 669 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 SLC39A8Q9C0K1 460 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 MUC3BQ9H195 1237 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 LRRC19Q9H756 370 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 DONSONQ9NYP3 566 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 SAE1Q9UBE0 346 aaPredicted RBP15.25■□□□□ 0.03
CCNE1-202ENST00000357943 SNX12Q9UMY4 172 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 OR51B4Q9Y5P0 310 aa15.25■□□□□ 0.03
CCNE1-202ENST00000357943 CTAGE9A4FU28 777 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 KAT7O95251 611 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 CETN2P41208 172 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 PRKCQQ04759 706 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 SLC10A2Q12908 348 aaPredicted RBP15.24■□□□□ 0.03
CCNE1-202ENST00000357943 TFDP2Q14188 446 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 POLD3Q15054 466 aaPredicted RBP15.24■□□□□ 0.03
CCNE1-202ENST00000357943 PLEKHG6Q3KR16 790 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 TMEM196Q5HYL7 178 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 PAPD7Q5XG87 772 aaKnown RBP15.24■□□□□ 0.03
CCNE1-202ENST00000357943 AFMIDQ63HM1 303 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 C1orf228Q6PIY5 440 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 NPNTQ6UXI9 565 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 ADIPOR2Q86V24 386 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 SIX5Q8N196 739 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 LZTR1Q8N653 840 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 COG1Q8WTW3 980 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 EZH1Q92800 747 aaPredicted RBP15.24■□□□□ 0.03
CCNE1-202ENST00000357943 ARHGEF2Q92974 986 aaKnown RBP15.24■□□□□ 0.03
CCNE1-202ENST00000357943 HMCESQ96FZ2 354 aa15.24■□□□□ 0.03
CCNE1-202ENST00000357943 MSANTD3Q96H12 275 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms