RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 OTULINQ96BN8 352 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 MED8Q96G25 268 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 SNX27Q96L92 541 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 CRYL1Q9Y2S2 319 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 V9GYQ6 96 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 hCG_1818297A0A087WSY0 165 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 MSI1O43347 362 aaKnown RBP15.19■□□□□ 0.02
COL17A1-201ENST00000353479 ERVK-10P10266 1014 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 AQP5P55064 265 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 PRMT2P55345 433 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 ARHGAP1Q07960 439 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 TAF10Q12962 218 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 MFSD4BQ5TF39 518 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 C7orf61Q8IZ16 206 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 ZCCHC2Q9C0B9 1178 aaKnown RBP15.19■□□□□ 0.02
COL17A1-201ENST00000353479 ACTR8Q9H981 624 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 SELENONQ9NZV5 590 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 MPP6Q9NZW5 540 aa15.19■□□□□ 0.02
COL17A1-201ENST00000353479 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL17A1-201ENST00000353479 A0A096LPK6 155 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 FAM95CA0A1B0GW59 222 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SNRPD1P62314 119 aaKnown RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 HJURPQ8NCD3 748 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 LGMNQ99538 433 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 COPS7BQ9H9Q2 264 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SLC45A1Q9Y2W3 748 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 OR56A5P0C7T3 313 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 GRK3P35626 688 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 NDUFV1P49821 464 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 COPAP53621 1224 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SP2Q02086 613 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 LRRC36Q1X8D7 754 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 FCRL2Q96LA5 508 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 MBOAT7Q96N66 472 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ACOX2Q99424 681 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SPEF2Q9C093 1822 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ACLYP53396 1101 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 FUT11Q495W5 492 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SETMARQ53H47 684 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 POLNQ7Z5Q5 900 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SERAC1Q96JX3 654 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 TRIM4Q9C037 500 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ADAM28Q9UKQ2 775 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 AHDC1Q5TGY3 1603 aaPredicted RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 CHADO15335 359 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ARIH2O95376 493 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 TARSP26639 723 aaKnown RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 RPL22P35268 128 aaKnown RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 PBX1P40424 430 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 HPCAP84074 193 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 FAAP100Q0VG06 881 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SLC22A9Q8IVM8 553 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ALLCQ8N6M5 410 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 BBS2Q9BXC9 721 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 DOT1LQ8TEK3 1739 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 IGF2BP3O00425 579 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 CCNG1P51959 295 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 PKN2Q16513 984 aaKnown RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 SLC25A52Q3SY17 297 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ELOVL6Q9H5J4 265 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 KLC4Q9NSK0 619 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 TMEM161AQ9NX61 479 aa15.18■□□□□ 0.02
COL17A1-201ENST00000353479 CHCHD3Q9NX63 227 aaKnown RBP15.18■□□□□ 0.02
COL17A1-201ENST00000353479 ZNF536O15090 1300 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 GRK2P25098 689 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 ABCG1P45844 678 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 SIAH1Q8IUQ4 282 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 NPLOC4Q8TAT6 608 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 ECSITQ9BQ95 431 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 THUMPD3Q9BV44 507 aaKnown RBP15.17■□□□□ 0.02
COL17A1-201ENST00000353479 TDRKHQ9Y2W6 561 aaKnown RBP15.17■□□□□ 0.02
COL17A1-201ENST00000353479 DUOX1Q9NRD9 1551 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 PARNO95453 639 aaKnown RBP15.17■□□□□ 0.02
COL17A1-201ENST00000353479 MT-CO1P00395 513 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 CYP3A5P20815 502 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 CYP2A7P20853 494 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 CRABP2P29373 138 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 NPAS4Q8IUM7 802 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 SYTL1Q8IYJ3 562 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 JADE3Q92613 823 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 HES6Q96HZ4 224 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 EXOC2Q96KP1 924 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 SEMA3CQ99985 751 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 SLC28A3Q9HAS3 691 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 RGPD5Q99666 1765 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 TMEM191CA6NGB0 347 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 LGR5O75473 907 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 MAXP61244 160 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 STX5Q13190 355 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 INTS6LQ5JSJ4 861 aaKnown RBP15.17■□□□□ 0.02
COL17A1-201ENST00000353479 BBS12Q6ZW61 710 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 XYLT1Q86Y38 959 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 TCP10LQ8TDR4 215 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 RBBP8Q99708 897 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 IL22Q9GZX6 179 aa15.17■□□□□ 0.02
COL17A1-201ENST00000353479 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms